| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04500 |
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| Symbol | secY |
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| ID | 6304788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1266326 |
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| End bp | 1267690 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642638562 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001912439 |
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| Protein GI | 188575510 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.705639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCAGG CTGGCATTGG TAACCTCGGT GGCGGGCTCG GCAAGTTCAC GGAACTTCGC
CAGCGGTTGC TGTTCGTCCT CGGGGCATTG ATCGTTTATC GCATCGGCTG CTATGTGCCG
GTGCCTGGCG TGAATCCCGA TGCCATGCTT TCGTTGATGC AGGCGCAGGG CGGCGGCATC
GTGGACATGT TCAACATGTT CTCGGGCGGC GCCCTGCACC GCTTCAGTAT TTTTGCGTTG
AATGTGATGC CGTACATTTC GGCATCGATC GTGATCCAGT TGGCCACGCA CATCTTTCCC
GCCCTCAAGG CGATGCAGAA GGAAGGCGAA TCCGGTCGAC GCAAGATCAC CCAATATTCG
CGTATCGGTG CGGTGTTGCT GGCGGTGGTG CAGGGCGGCA GTATTGCGCT GGCACTGCAG
CATCAGACCG CGCCCGGTGG CGCTCCGGTG GTGTATGCGC CGGGCCTGGG TTTCGTGCTC
ACTGCGGTCA TTGCGTTGAC TGCCGGCACC ATCTTCTTGA TGTGGGTTGG CGAGCAGGTC
ACCGAGCGCG GTATCGGTAA CGGTGTCTCG CTGATCATCT TTGCCGGTAT CGTGGCAGGC
CTGCCTTCCG CGGCCATCCA GACCGTCGAA GCGTTCCGCG AAGACAATCT GAGCTTCATT
TCGCTGTTGC TGATCGTGAT CACGATTCTG GCATTTACCT TGTTCGTGGT GTTCGTCGAG
CGAGGGCAGC GTCGGATTAC GGTGAACTAC GCGCGCCGTC AGGGCGGTCG CAATGCGTAT
ATGAACCAGG CCTCGTTTCT GCCGTTGAAG CTCAACATGG CCGGCGTGAT TCCGCCGATC
TTTGCGTCCA GCATCCTGGC ATTCCCGGCG ACGTTGTCGA TGTGGTCGGG TCAGGCGGCA
TCGGGTGGTA TTGGTTCTTG GCTGCAGAAG ATCGCCAACG CGCTTGGGCC CGGTGAGCCG
GTCCACATGC TGGTGTTCGC TGCGCTGATT ATTGGTTTTG CGTTCTTCTA CACCGCGTTG
GTGTTCAACT CGCAGGAAAC CGCCGACAAC CTCAAGAAGT CGGGCGCGCT GATTCCGGGC
ATTCGTCCGG GCAAAGCGAC GGCCGATTAT GTCGATGGCG TGCTGACGCG TTTGACCGCT
GCCGGTTCTC TGTACCTGGT CATCGTCTGC CTGCTGCCGG AAATCATGCG CACGCAGCTC
GGTACCTCGT TCCACTTCGG TGGCACCTCG CTGTTGATCG CGGTGGTGGT GGTGATGGAC
TTCATTGCGC AGATTCAGGC GCATCTGATG TCGCACCAGT ATGAGAGCTT GTTGAAGAAG
GCCAACCTGA AGGGTGGGTC ACGCGGCGGT CTTGCGCGTG GTTAA
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| Protein sequence | MAQAGIGNLG GGLGKFTELR QRLLFVLGAL IVYRIGCYVP VPGVNPDAML SLMQAQGGGI
VDMFNMFSGG ALHRFSIFAL NVMPYISASI VIQLATHIFP ALKAMQKEGE SGRRKITQYS
RIGAVLLAVV QGGSIALALQ HQTAPGGAPV VYAPGLGFVL TAVIALTAGT IFLMWVGEQV
TERGIGNGVS LIIFAGIVAG LPSAAIQTVE AFREDNLSFI SLLLIVITIL AFTLFVVFVE
RGQRRITVNY ARRQGGRNAY MNQASFLPLK LNMAGVIPPI FASSILAFPA TLSMWSGQAA
SGGIGSWLQK IANALGPGEP VHMLVFAALI IGFAFFYTAL VFNSQETADN LKKSGALIPG
IRPGKATADY VDGVLTRLTA AGSLYLVIVC LLPEIMRTQL GTSFHFGGTS LLIAVVVVMD
FIAQIQAHLM SHQYESLLKK ANLKGGSRGG LARG
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