Gene PXO_04429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04429 
Symbol 
ID6304506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand- 
Start bp1002301 
End bp1002996 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content70% 
IMG OID642638281 
Productconserved mebrane associated protein 
Protein accessionYP_001912163 
Protein GI188575234 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.729026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACCTC TCCATATCGA ACGCCATCGC AGCGACCAGG CCGGCTGGCT GCGTGCCGCC 
GTGCTCGGCG CCAACGACGG CATCCTCTCG GTGGCCGGCT TGCTGGTCGG TGTTGCCAGC 
AGCGGCGCGA CCGCAGCGGA CGTGCTGGCG ACCGGCATCG CCGGCCTGGT CGCCGGCGCG 
ATGTCGATGG CTGCTGGCGA ATATGTCTCG GTGCAATCGC AAGCGGATAC CGAGCACGCC 
GATCTGGCAT TGGAGCGCCG CGAACTGCGC GATCATCCGC AAACCGAATT GGAAGAGCTC 
GCTAGCATCT ACCGCCAGCG CGGATTGGAT ACCGCGCTGG CACGCCAGGT TGCCGAGCAA 
TTGACCGCCC ACGATGCGCT GGGCGCGCAT GCGCGCGACG AACTGGGCAT TACCGAAAGC 
CTGCGCGCGC GGCCGCTGCA GGCGGCGCTG GCATCGGCAG CGGCGTTTTG CTGCGGCGCG 
GTGCTGCCGA TCCTGGCGGC GCTGCTCGCA CCAGCGGGGC AAACGGCAGC GGTGACCAGC 
ACGGTCGCGT TGCTCGGTCT GGCCTTGACC GGCGCCGTGG CGGCGCGCAC CGGCGGCGCA 
TCCGGCCTGC GCGGCGCGCT GCGGGTGATG TTCTGGGGAG CCGCGGCAAT GGCCGCCACC 
GCTGCGATCG GGCAACTGTT CCACGTACAG GTCTAA
 
Protein sequence
MRPLHIERHR SDQAGWLRAA VLGANDGILS VAGLLVGVAS SGATAADVLA TGIAGLVAGA 
MSMAAGEYVS VQSQADTEHA DLALERRELR DHPQTELEEL ASIYRQRGLD TALARQVAEQ 
LTAHDALGAH ARDELGITES LRARPLQAAL ASAAAFCCGA VLPILAALLA PAGQTAAVTS 
TVALLGLALT GAVAARTGGA SGLRGALRVM FWGAAAMAAT AAIGQLFHVQ V