Gene PXO_04396 details

Gene Information

• Locus tag: PXO_04396
• Symbol: nusB
• ID: 6304541
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 1031573
• End bp: 1032043
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642638316
• Product: transcription antitermination protein NusB
• Protein accession: YP_001912198
• Protein GI: 188575269
• COG category: [K] Transcription
• COG ID: [COG0781] Transcription termination factor
• TIGRFAM ID: [TIGR01951] transcription antitermination factor NusB

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 0.371265
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAGC CCGGTGGACA CCCGCGCCAC GGCCGTCGCG ACGGCATCGA CCCGGTGCTG 
CGTTCGCGCG CACGTCGGCG TGCCTTGCAG GCAGTGTATG CGTGGCAGAT TTCCGGTGGC 
TTCGCCAAGC AGGTGATCGC CCAGTTCGCT CACGAGCAGG CGCACGAAGT GGCCGATCTG 
GCGTACTTCG AGAACCTGGT CGAAGGCGTG CTGACCAATC GTGCCGAACT GGATACCGCG 
CTGACCCCGT ACCTGGATCG CGGCGTGGAA GAGGTCGATG CGATCGAACG CGCAGTGCTG 
CGGTTGGCCG CCTACGAATT GCTGTACCGC CAGGACGTGC CGTACCGCGT GGTGATCAAC 
GAAGCGATCG AAACCGCCAA GCGCTTCGGC TCCGAACACG GTCACACCTA TGTAAACGGG 
GTGCTGGACC GCGCCGCTGT GGAGTGGCGC AAGGTCGAGT CCGGCGCTTG A 

 

Protein sequence

MSKPGGHPRH GRRDGIDPVL RSRARRRALQ AVYAWQISGG FAKQVIAQFA HEQAHEVADL 
AYFENLVEGV LTNRAELDTA LTPYLDRGVE EVDAIERAVL RLAAYELLYR QDVPYRVVIN 
EAIETAKRFG SEHGHTYVNG VLDRAAVEWR KVESGA