| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04215 |
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| Symbol | hmgA |
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| ID | 6304306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 793597 |
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| End bp | 794922 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642638084 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_001911966 |
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| Protein GI | 188575037 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAACC CGCAGCACTA CATGACCGGC TTCGGCAATG AGTTTGCAAC CGAGGCGGTG
GCCGGCAGTC TACCGGTCGG GCAGAACTCA CCGCAGCGCG TGGCGCATGG CCTGTACGCC
GAGCAGTTGT CCGGCACCGC CTTCACCGCG CCACGCGGCG AGAACCGGCG CAGCTGGCTG
TACCGCATTC GTCCGGCAGC GGTGCATGGC CGTTTCTCGC TGATCGAGCA GTCTCGGCTC
CACAACGACT TCGGCGGCGG CCCGGTACCG CCGGACCAGA TGCGCTGGAG TCCACTGCCG
TTGCCGGCCA CGCCCACCGA TTTCGTCGAT GGCCTGTACA CCATGGCCGG CAATGGCAGC
CCGGAGGCGA TGACCGGCGT GGCCGTGCAT CTATATGCGG CAAACGCGTC CATGCACGGG
CGGTTCTTCT ACAACGCCGA CGGCGAGCTG CTGCTGGTGC CGCAGCTTGG CCGGTTGCGG
GTCTGCACCG AACTGGGCGT GCTCGAACTG GAGCCGCAAC AGATCGGCGT GATACCGCGC
GGTGTGCGTT TCCGGGTGGA ACTGCTCGAT AGTGCAGCGC GTGGCTATGT CTGCGAAAAC
TTCGGCGGCC TGCTGCGGCT GCCGGATCTG GGGCCGATTG GTGCCAACGG CCTTGCCAAT
CCGCGCGATT TCGAGACCCC GCGTGCGGCG TTCGAGCAGC GCGACGGCGC ATTCGAGCTG
GTCGCCAAGT TCCAGGGCCA TCTGTGGCGG GCGGATATCG ATCACTCGCC GCTGGATGTG
GTCGCCTGGC ACGGCAATTA CGCGCCCTAT CGTTACGACC TACGTCGCTT CAACACCATC
GGCTCGATCA GCTTCGATCA TCCCGATCCC AGCATCTTCA CCGTGCTGAC CTCGCCCAGC
GACACGCACG GTACTGCGAA CATGGATTTT GCGATCTTCC CGCCGCGTTG GCTGGTGGCG
CAGCACACCT TCCGCCCGCC GTGGTTCCAT CGCAACGTCG CCAGCGAATT CATGGGGCTG
GTACACGGCG TCTACGATGC CAAGGCCGAA GGCTTCGCGC CCGGTGGGGC TTCGCTGCAC
AACTGCATGA GCGGGCACGG ACCGGATGCG GCGACCTTCG ACAAGGCCTC CCAGGCAGAT
CTCACGCGCC CGGACGTGAT CGCTGAAACC ATGGCTTTCA TGTTCGAAAC CCGCGCGGTG
TTGCGCCCCA CGCAGCAGGC GTTGAGCGCG GCGCATCGGC AAGCCGATTA CCAGCAGTGT
TGGTCCGGAT TGCGTGCCGC ATTTCAGCAT CCACCAGCGA AAAACACGAC GTCGGTTTTA
CGGTAA
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| Protein sequence | MHNPQHYMTG FGNEFATEAV AGSLPVGQNS PQRVAHGLYA EQLSGTAFTA PRGENRRSWL
YRIRPAAVHG RFSLIEQSRL HNDFGGGPVP PDQMRWSPLP LPATPTDFVD GLYTMAGNGS
PEAMTGVAVH LYAANASMHG RFFYNADGEL LLVPQLGRLR VCTELGVLEL EPQQIGVIPR
GVRFRVELLD SAARGYVCEN FGGLLRLPDL GPIGANGLAN PRDFETPRAA FEQRDGAFEL
VAKFQGHLWR ADIDHSPLDV VAWHGNYAPY RYDLRRFNTI GSISFDHPDP SIFTVLTSPS
DTHGTANMDF AIFPPRWLVA QHTFRPPWFH RNVASEFMGL VHGVYDAKAE GFAPGGASLH
NCMSGHGPDA ATFDKASQAD LTRPDVIAET MAFMFETRAV LRPTQQALSA AHRQADYQQC
WSGLRAAFQH PPAKNTTSVL R
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