| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03980 |
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| Symbol | |
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| ID | 6304121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 622079 |
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| End bp | 625219 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642637904 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001911789 |
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| Protein GI | 188574860 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.439806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCT CCGCGCCCTT CATCAAGCGC CCGATCGGCA CCTCGTTGCT GGCGATCGGT
TTGTTCGTGA TTGGATTGAT GTGCTACCTG CGGCTGGACG TGGCGTCGCT GCCGAACATC
CAGATTCCGA TTATTTTCGT GCACGCCACG CAGCCCGGTG CCGATGCCAG CACCATGGCC
TTCACCGTCA CCGCACCGCT GGAACGTCAC CTGGGCCAAT TGCCCGGGGT CGACCGCATG
CGCTCCTCCA GCTCGGAAAG CAGCAGCGTG GTCGTGCTGG TGTTCCAGAG CAGTCGCAAT
ATCGATTCGG CCGCGCAGGA CATCCAGACC GCGATCAATG CATCGCAGTC GGACCTGCCC
TCCGGGCTCG GGACGCCGAT GTACTCCAAG GCCAACCCGA ACGAAGACCC GGTGATCGCC
ATCGCGTTGA CCTCGGAAAC GCAATCGGCC GACGAGTTGT ACAACGTGGC CGACTCGCTC
CTGGCGCAGC GGCTGCGCCA GATCACCGGC ATCAGCTCGG TGGACATCGC CGGTGCATCC
ACCCCGGCAG TGCGCGTGGA TGTAGACCTG CGCGCGCTCA ACGCGCTCGG CCTGACCACG
GACAATCTGC GCAATGCGGT GCGCGCAGCC AACGTCACCT CGCCGACCGG ATTCCTGTCC
GACGGCAATA CCACCATGGC CATCATCGCC AACGATTCGG TGTCCAAGGC CGCCGATTTT
GCCCAGCTGG CGATCGCCAC CCAGTCCAAC GGACGCATCG TGCGGCTGGG CGATGTGGCC
ACTGTCTACG ATGGCCAGCA GGATGCCTAT CAAGCCGCCT GGTTCAACGG CAAACCGGCG
GTGGTGATGT ATGCCTTCAC CCGCGCCGGC GCCAACATCG TCGAAACCGT GGACCAGGTA
AAGGCGCACA TTCCCGAGCT GCGCAGCTAT CTGCAGCCCG GCACCACCCT GACGCCCTAC
TTCGACCGCA CGCCTACCAT TCGCGCTTCG CTACACGAGG TGCAGGCCAC GCTGATGATC
AGCCTGGCGA TGGTGATCCT GACCATGGCG CTGTTCCTGC GCCGGCTGGC GCCTACCCTG
ATCGCGGCGA TCACCGTGCC GCTGTCGCTG GCCGGCTCGG CGCTGGTGAT GTATGTGCTC
GGCTTCAGCT TGAACAACCT CAGCCTGCTG GCGCTGGTGA TCGCCATTGG CTTCGTGGTC
GACGATGCGA TCGTGGTGAT CGAAAATGTC ATGCGCCATC TCGACGAGGG CATGTCGCGT
ATGGAGGCGG CGTTAGCCGG TGCGCGCGAG ATCGGTTTCA CCATCGTCTC GATCACCGCC
TCGCTGGTGG CGGTGTTTAT CCCGATGCTG TTCGCCAGCG GCATGATCGG CGCGTTTTTC
CGCGAGTTCA CCGTGACCCT GGTGGCGGCG ATCGTGGTGT CGATGCTGGT GTCGCTGACC
TTGACGCCCG CGCTGTGCAG CCGCTTCCTG TCGGCACACG CCGAGCCGGA AAAGCCTGGC
CGCTTCGGCG CCTGGCTGGA TCGCATGCAC GAGCGCATGT TGCGTGTGTA CACGGTGGCG
CTGGATTTCT CGCTGCGCCA CGCGCTGCTG CTGTCGTTGA CGCCGTTGTT GCTGATCGCC
GCCACCATCT TCCTGGTTGG CGCGGTCAAG AAAGGCTCGT TCCCCGCGCA GGACACCGGC
CTGATCTGGG GGCGCGCCAA TTCCAGCGCC ACGGTGCCGT TCGCCGACAT GGTCAGCCGC
CAACGCCGCA TCACCGACAT GCTGATGGCC GACCCGGCGG TGAAAGCCGT CGGCGCACGC
CTGGGCTCCA GCCGTCAGGG CTCCAGCGCA TCGTTCAACA TCGAGCTGAA AAAGCGCGAT
GAAGGCCGTC GCGACACCAC CGCGGACGTG GTCGCACGTC TGAGCGCCAA GGCCGACCGT
TACCCGGATC TGGACCTGCG CCTGCGCGCG ATCCAGGACC TGCCCAGCGA TGGCGGCGGC
GGTACCAGCC AGGGCGCGCA ATACCGCGTG TCGCTGCAGG GCAACGACCT GGCGCAATTG
CAGGAATGGC TACCCAAACT GCAGGCCGCG TTGAAGAAGA ACCCACGCCT GCGCAATGTC
GGCACCGACG TGGATACCTC GGGCCTGCGC CAGAACATCG TGATCGACCG CGCCAAGGCT
GCGCGCCTGG GCGTTTCAGT CGGTGCCATC GACGGCGCGC TGTATGGCGC GTTCGGTCAG
CGCTCCATTT CCACCATCTA TTCCGATCTC AATCAGTACA ACGTGGTGGT CAATGCGCTG
CCGTCGCAGA CCGCCACGCC CAAGGCGCTG GACCAGATCT TCGTGCCCAA TCGTGCCGGC
CGGATGGTAC CGATCACCGC CGTCGCCACG CAGGTTCCAG GCCTGGCGCC GCCGCAGATC
ATCCATCAAA ACCAGTACAC CACGATGGAT CTGAGCTACA ACCTGGCGCC GGGCGTGCAC
ACGGGCGAGG CGGATCTGAT CATCAAATCC ACCGTGGACG GCTTGCGCAT GCCCGACGGC
ATCCGCCTCA GTGGCGGCGA CAGTTTCAAC GTGCAACTCA GCCCCAACTC GATAGGCATT
CTGCTGCTGG CGGCAGTGCT CACCGTCTAC ATCGTGCTGG GCATGCTCTA CGAGAGCCTG
ATCCACCCGG TGACCATCCT GTCCACCTTG CCGGCTGCCG GTGTGGGCGC GTTGCTGGCG
TTGTTCATCA CCAATACCGA ACTGTCGGTG ATTTCGATGA TTGCGCTGGT GCTGCTGATC
GGCATCGTCA AGAAGAACGC CATCATGATG ATCGACTTCG CGCTGGTGGC GCAGCGCGTG
CATGGCATGG ATGCGCGCGC GGCCGCACGC GAGGCGTCGA TCGTGCGCTT CCGCCCGATC
ATGATGACGA CGATGGTGGC GATCCTGGCC GCCGTGCCGC TGGCGGTGGG CCTGGGCGAA
GGTGCTGAGC TGCGTCGTCC GCTGGGTATC GCGATGATCG GCGGGCTGAT GTTTTCGCAG
AGCCTGACCC TGCTCAGCAC CCCGGCGCTG TACGTGATCT TCTCGTGCCT GAGCGAACGC
TGGAAGGCGC GTCGCGCCCG CAAGCGCGCG CAGCGGGCCG AACGTGCTGC GGCACGGCGT
CCGGCGGAAC CAGCACACTG A
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| Protein sequence | MNISAPFIKR PIGTSLLAIG LFVIGLMCYL RLDVASLPNI QIPIIFVHAT QPGADASTMA
FTVTAPLERH LGQLPGVDRM RSSSSESSSV VVLVFQSSRN IDSAAQDIQT AINASQSDLP
SGLGTPMYSK ANPNEDPVIA IALTSETQSA DELYNVADSL LAQRLRQITG ISSVDIAGAS
TPAVRVDVDL RALNALGLTT DNLRNAVRAA NVTSPTGFLS DGNTTMAIIA NDSVSKAADF
AQLAIATQSN GRIVRLGDVA TVYDGQQDAY QAAWFNGKPA VVMYAFTRAG ANIVETVDQV
KAHIPELRSY LQPGTTLTPY FDRTPTIRAS LHEVQATLMI SLAMVILTMA LFLRRLAPTL
IAAITVPLSL AGSALVMYVL GFSLNNLSLL ALVIAIGFVV DDAIVVIENV MRHLDEGMSR
MEAALAGARE IGFTIVSITA SLVAVFIPML FASGMIGAFF REFTVTLVAA IVVSMLVSLT
LTPALCSRFL SAHAEPEKPG RFGAWLDRMH ERMLRVYTVA LDFSLRHALL LSLTPLLLIA
ATIFLVGAVK KGSFPAQDTG LIWGRANSSA TVPFADMVSR QRRITDMLMA DPAVKAVGAR
LGSSRQGSSA SFNIELKKRD EGRRDTTADV VARLSAKADR YPDLDLRLRA IQDLPSDGGG
GTSQGAQYRV SLQGNDLAQL QEWLPKLQAA LKKNPRLRNV GTDVDTSGLR QNIVIDRAKA
ARLGVSVGAI DGALYGAFGQ RSISTIYSDL NQYNVVVNAL PSQTATPKAL DQIFVPNRAG
RMVPITAVAT QVPGLAPPQI IHQNQYTTMD LSYNLAPGVH TGEADLIIKS TVDGLRMPDG
IRLSGGDSFN VQLSPNSIGI LLLAAVLTVY IVLGMLYESL IHPVTILSTL PAAGVGALLA
LFITNTELSV ISMIALVLLI GIVKKNAIMM IDFALVAQRV HGMDARAAAR EASIVRFRPI
MMTTMVAILA AVPLAVGLGE GAELRRPLGI AMIGGLMFSQ SLTLLSTPAL YVIFSCLSER
WKARRARKRA QRAERAAARR PAEPAH
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