Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03920 |
Symbol | orfB |
ID | 6304058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 556903 |
End bp | 557415 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642637843 |
Product | ISPsy21, transposase OrfB |
Protein accession | YP_001911728 |
Protein GI | 188574799 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.67034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAGCGCT TCATCGACGA CCATCGCGAC GTTCACGGGG TCGAGCCGAT CTGCAAGGTG TTGCCGATCG CCCCGTCGAC GTACTACGCG CACGCGGCCC AAAGGTCCGA TCCTGAGTTG CGCTCGGCAA GGGCCAAGAC GGACGAGGCG TTGATGCCTG AAATCAGGCG TGTGTGGGAC GAGAACTTCC AGGTCTATGG TGTGCGTCAG CTCTGGCGGC AGATGCGGCG GGAGCAGTTC GCTGTTGCGC GCTGCACCGT GCAGCGTCTG ATGAAGCGCC AGGGCCTGCG CGGTGTCATC CGCGGCAAGG CGGTGCGCAC GACGGTGAGC GATGCGAAGG CGCCGTGCCC GCTCGATCAC GTCAACAGGC AGTTCACTTC GGATCGGCCA AACGCGTTGT GGGTCTCGGA CTTCACCGAT GTGTCGACGT GGCAAGGCTG GATCTACGTA GTCGCCCCTG AAAAACCCCT CTCAAACCTT CAGTACCATG TTTGCCGGCC ACATGATGCT TGA
|
Protein sequence | MKRFIDDHRD VHGVEPICKV LPIAPSTYYA HAAQRSDPEL RSARAKTDEA LMPEIRRVWD ENFQVYGVRQ LWRQMRREQF AVARCTVQRL MKRQGLRGVI RGKAVRTTVS DAKAPCPLDH VNRQFTSDRP NALWVSDFTD VSTWQGWIYV VAPEKPLSNL QYHVCRPHDA
|
| |