Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03463 |
Symbol | lldD |
ID | 6303540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 24191 |
End bp | 25357 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642637335 |
Product | L-lactate dehydrogenase |
Protein accession | YP_001911220 |
Protein GI | 188574291 |
COG category | [C] Energy production and conversion |
COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCATTT CCGCCGCTTC CGACTACCGC GCCGCCGCGC AAGCACGCTT GCCGCCGTTC CTGTTTCATT ACATCGATGG CGGCGCATAT GCCGAGCACA CCCTGCGGCG CAATGTCTCG GACCTGGCCG ATGTCGCGCT GCGCCAGCGG GTGCTGCGCA ATATGTCGGA CCTGCGCCTG AGCACCGAGC TGTTCGGCGA AACCTTGGCG ATGCCGGTGG CATTGGGGCC GGTCGGCCTC ACCGGGATGT ACGCACGCCG CGGCGAAGTG CAGGCAGCGC GTGCGGCGGC GGCGCGCGGC ATTCCCTTCA CCCTGTCCAC GGTGTCGGTG TGCCCGATCG AAGAAGTGGC ACCGGCGATC GAGCGGCCGA TGTGGTTCCA GCTCTACGTG CTCAAGGACC GCGGCTTCAT GCGCAATGCG CTGGAGCGCG CCAAGGCGGC GGGCGTGACC ACGCTGGTGT TCACCGTGGA CATGCCCACG CCCGGCGCGC GCTACCGCGA TGCGCACTCG GGCATGAGTG GGCCCAACGC GTCGCTGCGC CGCATGCTGC AGGCGGTAAC GCATCCGCGC TGGGCGTGGG ACGTGGGCGT GCTCGGCAAG CCGCATGATC TGGGCAACAT CTCCGCCTAC CGCGGCAACC CCACCGGACT GCAGGATTAC ATCGGCTGGC TGGGCGCCAA CTTCGATCCG TCCATTGCCT GGAAAGACCT GGAATGGATC CGCGAGTTCT GGACCGGGCC GATGGTGATC AAGGGCATCC TGGACCCGGA GGATGCACGC GATGCGGTGC GATTCGGCGC CGACGGCATC GTAGTCTCCA ACCATGGCGG GCGTCAGCTC GACGGCGTGC TGTCCAGCGC GCGCGCCTTG CCGGCGATTG CCGATGCAGT GAAGGGCGAG CTGAAGATCC TTGCCGATTC GGGCATCCGC AGCGGGCTGG ATGTGGTGCG CATGCTCGCG TTGGGTGCCG ACGCGGTGCT GCTTGGCCGC GCCTTCGTCT ATGCGTTGGC AGCCGATGGG CAGGCGGGCG TGGAAAACTT GCTGACCTTG ATCGAAAAGG AAATGCGCGT CGCAATGACG CTGACCGGCA CGCATTCCAT CGCCCAGATC AGCGCCGATG CGTTGAGCCG GGTGACGCGT GAGCAGGCCA ACGCGGTGTC GCCTTAG
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Protein sequence | MIISAASDYR AAAQARLPPF LFHYIDGGAY AEHTLRRNVS DLADVALRQR VLRNMSDLRL STELFGETLA MPVALGPVGL TGMYARRGEV QAARAAAARG IPFTLSTVSV CPIEEVAPAI ERPMWFQLYV LKDRGFMRNA LERAKAAGVT TLVFTVDMPT PGARYRDAHS GMSGPNASLR RMLQAVTHPR WAWDVGVLGK PHDLGNISAY RGNPTGLQDY IGWLGANFDP SIAWKDLEWI REFWTGPMVI KGILDPEDAR DAVRFGADGI VVSNHGGRQL DGVLSSARAL PAIADAVKGE LKILADSGIR SGLDVVRMLA LGADAVLLGR AFVYALAADG QAGVENLLTL IEKEMRVAMT LTGTHSIAQI SADALSRVTR EQANAVSP
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