| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03376 |
|---|
| Symbol | glgA |
|---|
| ID | 6303630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 99305 |
|---|
| End bp | 100834 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642637424 |
|---|
| Product | glycogen synthase |
|---|
| Protein accession | YP_001911309 |
|---|
| Protein GI | 188574380 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0297] Glycogen synthase |
|---|
| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCCGG CGTTGAAGAA GGGCGGTCGA CCGCGCGATG CGCTCGGCCG TTTCATTCGT
CACCACGAGC GCTTGCCGGT GTCGCTGGCA GACACGCGTG GCGTCTTGTT CGTGGTGTCG
GAGATGGCGG ACTTCATCAA GGCCGGTGGT CTGGGCGATG TCGCCGCCGC GCTGCCGCGC
GCCCTGCGCC ATCGCTACGA CGTGCGCGTG CTGATCCCCG GCTACCGCGC AGTGCTCGAG
CGCGCCGGTA AGGTGGAGAT CGTCGGCCGT GTCCTGGCGC ATGCCGCGCT GCCGGCCTGC
GACATCGGCC GCATCGTGCA GTCCGACGGG CTGCCCATCT ACATCCTGCT GTCCAGGGAA
TTGTTCGAAC GCGACGGCTC GCCGTATGTG AGCACCAGCG GTTCGGAATT CGAAGACAAC
GCGATCCGTT TCGCCACCTT GTCGCATGCC GCCGCGGACA TTGCCGCCGG CCATGCCGGG
CTGGGCTGGA AGCCGCGCCT GCTGCATCTG AACGACTGGC CGTGCGCGCT GGCGGCCGGC
TACGTGCGTT GGTCCGGCGG CACCACACCG TGCCTGCTGA CCATCCATAA CCTGGCCTAT
CAGGGCTTGG TGCCGTATTC GATGGCGGGC GCGCTGGGCA TTCCCGCCGA GCGAGTGGCG
GAGTTGGAGT TTTACGGGCA GATGTCGTTC CTGCGCGGCG GCATCGTCAA CGCCGATCAC
GTCAACACGG TCAGCGTCAG CTACGCAAAG CAGATCACCG GCCCGGCCCA GGGGTGCGGC
CTGGACCGGC TGCTGGCCGG TCGCGCCGCC AAGGGCGTGC TCACCGGCAT CGTCAACGGC
ATCGACGCCA GTTGGGATCC GCGCACCGAC GAATACCTGG ATTCGCACTT CAGCGTGAAC
CAGTGGCAGG GCCGTCAGGA CAATGCAGCG CAAGTGCGCA AGGCGTTCGG GCTGCGCGAA
AGCACCGGCC CGTTGTTTGC GGTGGTATCG CGGCTGGTGC ACCAAAAGGG CCTGGACCTG
ATCTGCGAGG TCGCCCCGCA GATCGTAGCG GCCGGTGGCC AGATCGCAGT GATCGGCGGT
GGCGAGCCTG ACATCGAGCG CCAGGTGGCC GAATTGACCC GGCGCTATCC GGGCCAGGTG
GGTGCCTTCA TCGGGTTCGA GGAAGGCCTG GCGCGGCGGA TGTTCGCCGG TGCCGATTTC
CTGCTGATGC CCTCGCGCTT CGAGCCCTGC GGCTTGAGCC AGATGTACGC GCAGCGCTTC
GGCTGCCTGC CGATCGCACA CGCCACCGGC GGGCTGATCG ACACCGTAGA CGACGGCGTG
ACCGGCTTCC TGTTCCAGCA CGCCAGCGTC GAAGCCTTGC GCCGTTGTCT GGAGCGCGCC
TTCCGCACGT TCCGCCTGCC TGGCCTGCTG GCGGCGATGC GGCGCGCAGC GATGCTGCGT
CCCAGCGGTT GGGACGTGGC GGGCAACAAA TATCTCTCTC TCTACGAACG CACCGCTGCA
ATCGCGCCTG CGCTTGCGAC GGTGTCATGA
|
|---|
| Protein sequence | MLPALKKGGR PRDALGRFIR HHERLPVSLA DTRGVLFVVS EMADFIKAGG LGDVAAALPR
ALRHRYDVRV LIPGYRAVLE RAGKVEIVGR VLAHAALPAC DIGRIVQSDG LPIYILLSRE
LFERDGSPYV STSGSEFEDN AIRFATLSHA AADIAAGHAG LGWKPRLLHL NDWPCALAAG
YVRWSGGTTP CLLTIHNLAY QGLVPYSMAG ALGIPAERVA ELEFYGQMSF LRGGIVNADH
VNTVSVSYAK QITGPAQGCG LDRLLAGRAA KGVLTGIVNG IDASWDPRTD EYLDSHFSVN
QWQGRQDNAA QVRKAFGLRE STGPLFAVVS RLVHQKGLDL ICEVAPQIVA AGGQIAVIGG
GEPDIERQVA ELTRRYPGQV GAFIGFEEGL ARRMFAGADF LLMPSRFEPC GLSQMYAQRF
GCLPIAHATG GLIDTVDDGV TGFLFQHASV EALRRCLERA FRTFRLPGLL AAMRRAAMLR
PSGWDVAGNK YLSLYERTAA IAPALATVS
|
|---|
| |