Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03361 |
Symbol | virK |
ID | 6303647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 124703 |
End bp | 125134 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642637441 |
Product | VirK |
Protein accession | YP_001911326 |
Protein GI | 188574397 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0194089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCACGTC TTGTTCCTGC CGCGCTGTTT GCGACGCTAT GCGCATGTGC GCTGCCCGCC CTGGCCACCG AATCGCTGAA TAACCGCGCC GAAGTTCTCG CTGCCCTGGA CGCCGGTTAC GACGTCAGTG TGAGCACCGA CCTTGCACGT TGCGTGCCCG AAGAAGGCAC ACCGGTCACC CAGACCCGCG GCGGCCGCCA TATCGATGCC TACCGCATCA CCGCGGACGG CACCGTGGCC TTTTCCGATT CGCATTTCAC CGTCGCCAAC GACGGCAAGC CGATCCAGCA ATTCATGCGC TACCAACTGC TCCCGGATGG CAGCCTGCGC TTCACCACCT ATATGTACGA CCTGCCAGGC CTGCAGCAAC GTGGACCGGT GCTGGCGTAT CAATGCAAGC TCAATGAAGG CATCCGTTTC CACGCCAATT GA
|
Protein sequence | MPRLVPAALF ATLCACALPA LATESLNNRA EVLAALDAGY DVSVSTDLAR CVPEEGTPVT QTRGGRHIDA YRITADGTVA FSDSHFTVAN DGKPIQQFMR YQLLPDGSLR FTTYMYDLPG LQQRGPVLAY QCKLNEGIRF HAN
|
| |