| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03235 |
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| Symbol | ligK |
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| ID | 6308573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 5154680 |
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| End bp | 5155339 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642642287 |
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| Product | hypothetical protein |
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| Protein accession | YP_001916112 |
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| Protein GI | 188579183 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
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| TIGRFAM ID | [TIGR02798] 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCAGG TCGTCACCCG GATCGAGCGC ACCCCGCTGG CCGTCGTCGA CGGGCTGGCG
CAGGCCGGGG TCGCCACCGT GCACGAAGCG CAGGGACACA GCGGCCTGCT GCACCACCGG
CTACGCCCCA TCTACGCCGG CTGCCGCATC GCCGGTACCG CGGTCACCGT GTTGATTCCG
CCCGGCGACA ACTGGATGAT GCATGTGGCC ATCGAGCAAC TGCACCCAGG CGATGTGCTG
GTGGTCGCGC CGACCAGCGA CTGTTGCGAC GGCTACTTCG GCGACCTGCT TGCCACTTCG
GCGCAAGCGC GCGGTTGCCG CGGGCTGATC ATCGATGCCG GCGTGCGCGA TGTGCGCGAT
CTCACCGCCA TGCAGTTCCC GGCCTGGAGC CGCGCCATCT GCGCGCAGGG CACCATCAAG
GAGACGCTGG GTTCGGTCAA CGTGCCCTTG GTGTGCGCCG GGCAAATGAT CCAGCCCGGT
GATGTGGTGG TGGCCGACGA CGATGGCGTG TGCGTGGTGC CGCGTGCCAG CGCCGCCGAT
GCGCAGGCGC GCGAGGCACG CAAGCTGCGC AAGCGCGAGC GCCTGGCAAA CGGCGAACTG
GGCCTGGATA TCTATGCAAT GCGCGAACGC CTGGCCGCCA AGGGCCTGCG TTATGTCTGA
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| Protein sequence | MSQVVTRIER TPLAVVDGLA QAGVATVHEA QGHSGLLHHR LRPIYAGCRI AGTAVTVLIP
PGDNWMMHVA IEQLHPGDVL VVAPTSDCCD GYFGDLLATS AQARGCRGLI IDAGVRDVRD
LTAMQFPAWS RAICAQGTIK ETLGSVNVPL VCAGQMIQPG DVVVADDDGV CVVPRASAAD
AQAREARKLR KRERLANGEL GLDIYAMRER LAAKGLRYV
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