| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03172 |
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| Symbol | rfbD |
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| ID | 6308010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 4624719 |
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| End bp | 4625627 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642641737 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_001915574 |
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| Protein GI | 188578645 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.430653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACCACGC TGGTTTTTGG CGCAAATGGG CAGGTGGGTA CGGAATTGCT GCGTGCGCTG
GCAGTCGATG GCGCCGTACA GGCCACCACG CGTAGTGGCC AGTTGCCCGA CGGCAGCGCG
TGTGAAACAG CAGACTTCGA TGCGCCTGAG ACGCTGACCG CATTGCTGGA TCGAATCAAG
CCGTCGCGTG TGGTCAATGC CGCCGCTTAC ACGGCTGTAG ATCGTGCCGA GCAGGATCGG
GAACGCGCGA CCCGTGCCAA TGCGACGGCA CCCGGCGTCG TCGCAGCCTG GTGCGCGTCC
AATCGTGTGC CGCTTGTGCA TTACTCCACC GATTACGTCT TCGACGGGCA GGGCGCAGCG
CCATATCGCG AGAACGCGCA GACGTCGCCA CTCGGCGTGT ACGGCGAAAC CAAGCTTGCC
GGCGAGCAGG CCATCCGTGC CTCCGGCGCC CAGCATCTGA TCCTGCGGAC TGCTTGGGTC
TACGCCTCGC ATGGCGCGAA CTTCCTGCGC ACGATGTTGC GGGTAGGGGC GGAGCGGGAC
GAGTTGCGTG TGGTGGCCGA TCAGATCGGA ACACCGACGC CGGCGGCATT GATTGCCGAT
GTCACTGCAC AACTGCTGCG TCAGCGCACG CCCGATACAT CGGGGACCTG GCATCTCACC
GCGGCTGGCC AGACCAGCTG GCATGGATTT GCCGAGGCAA TCTTCGAAGA GGCGGTCAGT
GCCGGGTTGC TGGAGCGTGC ACCGCGCGTG GTGCCGATCA CGACGGCCGA TTATCCGACG
CCAGCCAGGC GTCCGGCATA TTCGCGGTTG TCCATCGATA CACTGCAGGG CGATTTCGGT
ATCGAGCTGC CTGAGTGGCG CGTTGGCCTG CAGCGTGTGA TTGCCGAGCT GTCTGCGGCG
AAGAAGTAG
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| Protein sequence | MTTLVFGANG QVGTELLRAL AVDGAVQATT RSGQLPDGSA CETADFDAPE TLTALLDRIK
PSRVVNAAAY TAVDRAEQDR ERATRANATA PGVVAAWCAS NRVPLVHYST DYVFDGQGAA
PYRENAQTSP LGVYGETKLA GEQAIRASGA QHLILRTAWV YASHGANFLR TMLRVGAERD
ELRVVADQIG TPTPAALIAD VTAQLLRQRT PDTSGTWHLT AAGQTSWHGF AEAIFEEAVS
AGLLERAPRV VPITTADYPT PARRPAYSRL SIDTLQGDFG IELPEWRVGL QRVIAELSAA
KK
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