Gene PXO_02905 details

Gene Information

• Locus tag: PXO_02905
• Symbol: pcaF
• ID: 6308287
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 4895837
• End bp: 4897045
• Gene Length: 1209 bp
• Protein Length: 402 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 642642011
• Product: beta-ketoadipyl CoA thiolase
• Protein accession: YP_001915843
• Protein GI: 188578914
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0183] Acetyl-CoA acetyltransferase
• TIGRFAM ID: [TIGR01930] acetyl-CoA acetyltransferases; [TIGR02430] beta-ketoadipyl CoA thiolase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGATG TGTATCTGAT CGATGGCATC CGCACGCCGA TCGGCCGTTA CGGTGGCGCC 
TTGTCCAGCG TGCGCGCTGA CGACCTGGGT GCGGTGCCGA TCGCCGCGCT GCTCGTGCGC 
CATCCGCAGA TGGAGCCCGC CGCAATCGAC GATGTGTACC TGGGCTGCGC GAACCAGGCC 
GGTGAAGACA ATCGCAATGT CGCGCGTATG AGTCTGTTGC TGGCCGGCGT GCCCTCTTCG 
GTGCCGGGTA GCACGCTCAA TCGCCTCTGC GGTTCGGGGC TGGACGCAGT CGGCACGGTG 
GCGCGTGGCA TTCGTGCCGG CGAACTGGAT CTTGCGATTG CCGGCGGTGT CGAATCGATG 
TCGCGTGCGC CGTGGGTCAT GGGCAAGGCC GACAGCGCCT TCGCCCGCAA CCAGCAGCTG 
GAAGACACCA CCATGGGCTG GCGCTTCATC AATCCGCGCC TGCAAGCCGC CTATGGCACC 
GAATTGATGG GCGAAACCGC CGAGAACCTC GCGCAGCTTC ATGCCATCGC GCGCGAAGAC 
CAGGATGCGT TTGCACTGCG CAGTCAACAA CGCGTGGCGG CGGCGCAGGC GGCCGGCTTC 
TTCGATGGAG AAATCACTTC GGTGGCAGTG GCCGGGCGCA AAGGCGGCGA TGCCAGCACC 
GTCGAATACG ATGAGGCGCC GCGGCCCAAC ACCACGGCTG AGATGCTGGC CAAGCTCAAG 
CCGGTGTTTC GCCAGCCCGG GACCGTGACG GCCGGCAATG CCTCCGGTCT CAACGATGGC 
GCCGCTGCCT TGCTGCTGGC CTCTGCGCAG GCTGTGCAGG CGCATCGCCT GACGCCGCGT 
GCGCGGGTGC TGGGGTTCGC CTCGGCTGGC GTGGAGCCGG CGTATATGGG CATCGGCCCG 
GTGCCGGCCA CCCAGCGCCT GCTGGCGCGG TTGCACTTGC GCATCGCGCA GTTCGATGCG 
ATCGAACTCA ATGAAGCCTT TGCTGCACAG GCACTGGCCT GCACACGCGC ATTCGGGCTG 
GCCGACGATG CCGCACACGT CAATGCCAAC GGTGGCGCCA TCGCGCTGGG GCATCCGCTC 
GGCATGAGCG GCGCGCGGCT GGCGCTGACC CTGCTGCGGC AGCTGGAAGC CAGCAACGGG 
CGACTCGGGC TGGCCAGCAT GTGCATCGGG GTGGGGCAGG GCGTAGCGCT GGCGATCGAA 
CGCCTGTGA 

 

Protein sequence

MSDVYLIDGI RTPIGRYGGA LSSVRADDLG AVPIAALLVR HPQMEPAAID DVYLGCANQA 
GEDNRNVARM SLLLAGVPSS VPGSTLNRLC GSGLDAVGTV ARGIRAGELD LAIAGGVESM 
SRAPWVMGKA DSAFARNQQL EDTTMGWRFI NPRLQAAYGT ELMGETAENL AQLHAIARED 
QDAFALRSQQ RVAAAQAAGF FDGEITSVAV AGRKGGDAST VEYDEAPRPN TTAEMLAKLK 
PVFRQPGTVT AGNASGLNDG AAALLLASAQ AVQAHRLTPR ARVLGFASAG VEPAYMGIGP 
VPATQRLLAR LHLRIAQFDA IELNEAFAAQ ALACTRAFGL ADDAAHVNAN GGAIALGHPL 
GMSGARLALT LLRQLEASNG RLGLASMCIG VGQGVALAIE RL