| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02768 |
|---|
| Symbol | |
|---|
| ID | 6308428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 5029065 |
|---|
| End bp | 5029454 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642642147 |
|---|
| Product | cupin region |
|---|
| Protein accession | YP_001915977 |
|---|
| Protein GI | 188579048 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.711044 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGCC GTCAGAAGCG CGCGCTGGGT GACGTGTTCG GGCTGCGCAA CTTCGGCGTC
AACCTGACCA CGTTGGCGCC AGGTGCACGC TCGGCGCTGC GACACGGGCA TTCGCTGCAG
GACGCATTCG TCTACATCAT CACCGGTGCG CCGACGCTGA TCACCAACGC AGGCGAGCAG
GTGCTGCAGC CGGGTATGTG CGTCGGCTTC CGCGCCGGTG ATGGCGATGC GCATTGCCTG
ATCAATCGCA GCGAGGCGGT GGTGACGTAC CTGGAAGTGG GCGACCGCAG TGCCGGCGAT
AGCGTGGCCT ATCCGGACGA TGACCTGATG CTGGTCCCCC TGGCAGACGG GCAGCGCGTG
TACCGGCACA AGGACGGCAC GCCCTACTGA
|
|---|
| Protein sequence | MGGRQKRALG DVFGLRNFGV NLTTLAPGAR SALRHGHSLQ DAFVYIITGA PTLITNAGEQ
VLQPGMCVGF RAGDGDAHCL INRSEAVVTY LEVGDRSAGD SVAYPDDDLM LVPLADGQRV
YRHKDGTPY
|
|---|
| |