Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02603 |
Symbol | thiC |
ID | 6307848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 4452181 |
End bp | 4454058 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642641579 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_001915417 |
Protein GI | 188578488 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCCG CGCCTACCGT TTTGCAGCAA CAAGCCCAGT CGTTGTCCGA GGCTGTCACC CAACCGATTC CCGGTTCACG CAAGATCTTC GTGCAAGGCT CGCGCGCGGA TCTGCAGGTG CCGATGCGCG AGATCGCGTT GACGCGCACG CCCACCTTGT TCGGTGGCGA AGAGAATCCG CCGCTCAGCG TCTACGACAC TTCCGGGCCT TATACAGATC CGCAGGTGGC TATCGATCTG GCCGTTGGTC TGGCACCGCT GCGCGCGCAC TGGATTGCCG AGCGCGGCGA CACCGTCGCA CTGGATGGGC TGAGCTCCAG TTTCGGGCGT GGCCGCGAGC ACGATGCGCG TCTGGATGCC GTGCGCTTTC CGGCGCGGCG CTTGCCGCGG GTCGCGCGCG AGGGCGCCAA CGTCACCCAG ATGCATTACG CACGCCGCGG CATCATCACG CCGGAAATGG AGTACGTGGC GATCCGCGAA AATCAGCGTC TGGAAGCGGT GACCGATGCG AGCTTGCGTA AGCAGCATCC GGGCGAGGCG TTCGGCGCCT CGATCCAGCA GCGCATCACG CCGGAGTTCG TACGCGAGGA GATCGCACGG GGGCGCGCGA TCCTGCCCAA CAACATCAAT CATCCTGAAA GCGAGCCGAT GATCATCGGT CGCAATTTCC TCACCAAGAT CAACGCCAAC ATCGGCAACA GCGCCGTGTC TTCGGGCATT GCCGAAGAAG TCGAGAAGCT GGTGTGGTCG ATCCGCTGGG GCGGCGATAC GGTGATGGAT CTGTCCACCG GCAAGCACAT CCATGAAACG CGCGAATGGA TCATCCGCAA CTCGCCGGTG CCGATCGGTA CAGTGCCGAT CTATCAGGCA TTGGAAAAAG TCGACGGACG TGCCGAGGCG CTGACCTGGG AAATTTTCCG CGACACCTTG ATCGAACAGG CCGAACAGGG CGTGGATTAC TTCACCATCC ACGCCGGCGT ACTGTTGCGC TACGTACCGC TGACCGCAAA GCGGGTGACC GGCATCGTGT CGCGTGGCGG TTCTATCATG GCCAAGTGGT GCCTGGCGCA TCACAAGGAA AATTTTCTCT ATACGCACTT CGAAGACATC TGCCAGATCA TGAAGGCCTA CGACGTGGCG TTCTCGTTGG GCGATGGCTT ACGCCCCGGC TGCATTGCCG ACGCGAATGA CGCGGCCCAA TTCGGCGAGC TGGAAACGCT GGGCGAGTTG ACCAAACTGG CGTGGAAGCA CGATGTGCAA ACCATGATCG AAGGCCCCGG TCATGTGCCG ATGCAATTGA TCAAGGAGAA CATGGACAAG CAGCTGCGCG AATGCGGCGA GGCGCCGTTT TACACCCTGG GGCCGCTGAC CACCGACATC GCGCCGGGCT ACGACCACAT CACCAGCGCG ATCGGTGCGG CAATGATCGG CTGGTTCGGC ACGGCAATGC TCTGCTATGT CACTCCGAAA GAGCATCTGG GTTTGCCCAA TCGGCAGGAC GTGCGCGACG GCATCATGGC CTACAAGATC GCCGCGCACG CAGCCGACCT CGCCAAGGGG CATCCGGGCG CGCAGGTGCG CGACAACGCC CTGAGCAAGG CGCGTTTCGA GTTCCGTTGG GATGACCAGT TCCATCTCGG TCTGGATCCG GAAAAGGCCA AGGAGTTCCA CGACGAGACG CTGCCCAAGG ACGCGCACAA GCTGGCGCAC TTCTGTTCGA TGTGCGGGCC GCATTTCTGC TCGATGAAGA TCACCCAGGA CGTACGCGAT TACGCGGCCG AGCACGGCAT GGACGACGCG CAAGCGTTAT CGACAGGAAT GCAGGAGAAG TCGGCGCAGT TTCTGGCGCA AGGTGCGCAG GTGTATCGCC CCATGTGA
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Protein sequence | MNAAPTVLQQ QAQSLSEAVT QPIPGSRKIF VQGSRADLQV PMREIALTRT PTLFGGEENP PLSVYDTSGP YTDPQVAIDL AVGLAPLRAH WIAERGDTVA LDGLSSSFGR GREHDARLDA VRFPARRLPR VAREGANVTQ MHYARRGIIT PEMEYVAIRE NQRLEAVTDA SLRKQHPGEA FGASIQQRIT PEFVREEIAR GRAILPNNIN HPESEPMIIG RNFLTKINAN IGNSAVSSGI AEEVEKLVWS IRWGGDTVMD LSTGKHIHET REWIIRNSPV PIGTVPIYQA LEKVDGRAEA LTWEIFRDTL IEQAEQGVDY FTIHAGVLLR YVPLTAKRVT GIVSRGGSIM AKWCLAHHKE NFLYTHFEDI CQIMKAYDVA FSLGDGLRPG CIADANDAAQ FGELETLGEL TKLAWKHDVQ TMIEGPGHVP MQLIKENMDK QLRECGEAPF YTLGPLTTDI APGYDHITSA IGAAMIGWFG TAMLCYVTPK EHLGLPNRQD VRDGIMAYKI AAHAADLAKG HPGAQVRDNA LSKARFEFRW DDQFHLGLDP EKAKEFHDET LPKDAHKLAH FCSMCGPHFC SMKITQDVRD YAAEHGMDDA QALSTGMQEK SAQFLAQGAQ VYRPM
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