Gene PXO_02575 details

Gene Information

• Locus tag: PXO_02575
• ID: 6307821
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 4421264
• End bp: 4421884
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642641552
• Product: pseudouridylate synthase
• Protein accession: YP_001915390
• Protein GI: 188578461
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0564] Pseudouridylate synthases, 23S RNA-specific

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGCGATG CCAACGACCA TGCCTTGGCG CTTGCAGCGC CCTATCGCGT GGGTGCGGAA 
ATCCGCTATT TCCGCGAGGT CGCCGATGAG CCAGTGATTC CGTATGTCGA GACCGTGCTG 
CACGCCGACG CGAATCTGGT CGTGGCCTGC AAACCGCATT TTTTGCCGGT TGCGCCGGCC 
GGTGCGTATG TGCACGAGAC GCTGCTGACG CGACTGGTGC GGCGGCTGGA CAATCCGGCG 
CTGGTGCCGT TGCACCGCAT TGATCGCGAG ACCGCCGGGC TGGTACTGTT CTCGGCGAAC 
CCGGCCACGC GCGGAATCTA TCAGGCGTTG TTTCGCGAGC GGCGCATCCG CAAGCAGTAC 
CTCGTGGTGG CACCGCCGCT GCCAGAGTTG AGCTTTCCGT ACGTGCACCG CAGCTGGCTG 
GAGCCGGGTG AGCCGTTCTT CCGCATGCGC GAGGGCGTGG GCGAACCGAA TAGCGAGACG 
GTGATCGATG TGGTCGCGCC CGGAGCAGAC ACATGGACGT ATCGGCTGGA GCCCGTCACC 
GGCCGCAAGC ATCAGTTGCG TGTACACATG GCCGCGCTAG GCGCGCCGAT CCTGCACGAT 
CGTTTCTATC CCGACCTCTA A 

 

Protein sequence

MRDANDHALA LAAPYRVGAE IRYFREVADE PVIPYVETVL HADANLVVAC KPHFLPVAPA 
GAYVHETLLT RLVRRLDNPA LVPLHRIDRE TAGLVLFSAN PATRGIYQAL FRERRIRKQY 
LVVAPPLPEL SFPYVHRSWL EPGEPFFRMR EGVGEPNSET VIDVVAPGAD TWTYRLEPVT 
GRKHQLRVHM AALGAPILHD RFYPDL