Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02425 |
Symbol | |
ID | 6307660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 4275286 |
End bp | 4275855 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642641397 |
Product | ISXo3 transposase ORF B |
Protein accession | YP_001915245 |
Protein GI | 188578316 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGGCA ACCCACTTGA AATTCAAGAG AGCCTAAAAA ATCAGGTTGG CGCGGCCCGC GAGAAACAGG GGCGCAAGGC CTGCAGTACG TTCTTGATCG TGGACGCGCA GAGCGTGAAG AACAGTGATA CAGCCGGCCA GAAAGGCTAT GACGCGGGCA AGAAGGTATC GGGGATCAAG CGCCACATCG CGGTGGATAC GCAAGGCTTT CCACATGCCG TTGCGGTGAC CACGGCGGAA GTCACCGATC GTCAAGGTGC GCTGGAGGCA TTGAAACGCT GCCGATCGGG TTTAGGTCGG GTGAAACGCC TGCTGTGCGA CAGCGGCTAC ACCGGAGATC CCTTCGCCGA GGGCGTACAG GACATTCTGG GCAAGCATGT CACCGTACAG ATTGCCAAGC GCAGCGAGCT GCATACCTTC AAGGTCATGC CCAAGCGCTG GAGTGTCGAA CGCAGCTTTG CCTGGCTGGA GAAGAACCGG AGGCTATGGA AGAACTGCGA GCGAACGCTC AATACCAGCT TGCAGTTCAT CCACCTGGCG TTCCTGGCAC TGCTGCTCAG GAGATTGTGA
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Protein sequence | MPGNPLEIQE SLKNQVGAAR EKQGRKACST FLIVDAQSVK NSDTAGQKGY DAGKKVSGIK RHIAVDTQGF PHAVAVTTAE VTDRQGALEA LKRCRSGLGR VKRLLCDSGY TGDPFAEGVQ DILGKHVTVQ IAKRSELHTF KVMPKRWSVE RSFAWLEKNR RLWKNCERTL NTSLQFIHLA FLALLLRRL
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