| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02344 |
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| Symbol | |
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| ID | 6307582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 4191586 |
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| End bp | 4193409 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642641320 |
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| Product | tetratricopeptide repeat domain protein |
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| Protein accession | YP_001915168 |
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| Protein GI | 188578239 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGATGA ACGCGCTGAC CGAGCTGGCG GGGCCGCTGC AGGCGTTGCA TCTCCTGCGT
CCGACGCTGT TGTTGGCGCT GCTGGCGATC GTGCCGGCGG CGGCGTTGTG GCACTGGCGT
CGCCGCGATA CCGACGTCTG GCGGCAAAGC GTGGATGCGC ATCTGCTGTC GACATTACTG
GTTGCCGGTG GTCGGCGCGG GTGGTTGGGA TTCGTGCTGG CCGCATTGAC GTATACGCTG
GCGGTGGTGG CGATGAGTGG GCCGAGTTGG CGCCAGACCG AGCGCCCGGT GTATCAAACC
AGCATGCCGC TGGTGGTGGT GCTGGATCTA TCGTCAAGCG CCAACGCAAC CGACCTGCCG
CCATCGCGCC TGCTGCAGGC GCGCGCCAAG CTGGCGACGC TGCTGCGTAA ACGCGCCGGT
GGCGAGGTTG CATTGCTGGT CTATGCGGGC GAGAGCTTCA CGGTTGCGCC GTTGACCGAA
GACAGCGCCA ATGTGGCCTT GTTTCTGGAT GCGCTGTCGC CATCGGTGAT GCCGGTCGAT
GGCAAGCGCG CGGACCGGGG CATCGATGCG GCCGCTCAGT TGTTGCAGCA AGCGGGCTTC
AAACAGGGCG AAATTCTGCT GGTCAGCGAT GGCGCGGATC GTTCCGCTGA AAGTGCCGCG
CGTACGGCGC GCTCGCGCGG CTTCACCGTT TCTGCGCTCG GCATGGGCAG CGAGCGTGGC
GCAGCGTATC GCATGGCCAG CGGCGAGATT GCGCAGGCCA AGCTCGACGA AGGTAGTCTG
CGCGATCTGG CCGGGCAGGG CGGTGGACGG TATGCACGCA TCGCGCCGGA CGATGCGGAC
CTGCGCGCCC TGGGCGTGCT CGATCCGTCG CAACAGCCGT TGGCCGATGA AACCGCCGAG
TCCGATGGCG GCAAGACCTG GCTCGACGAA GGCTATTGGC TGGTGCTGCC GGTGATGCTG
CTGGCCTTGC TGGCGTTTCG CCGCCGCGCG GTGGTGGCGG TGCTGGCAAT GGTGTGTGTG
CTGCCGTTTG CGCAGCCCGC GCGTGCGGCC GATGGCACCT TGTGGCAGCG TGCCGATCAG
CTGCAACAAC AGCGCCTGGA TGCCGGCGTG CAGGCGTATC GCAAGGGCGA TTTTGCAGCG
GCGCAGAAGG CGTTCGAAGC GGTGCCAACC GACGAGGGGC TGTACAACCT GGGCAACGCG
CTGGCGCGAC AAGGCCAATA TGACGCGGCG ATCGACGCCT ATGACCGTGC GCTCAAGCAA
CATCCGAATC AGCAGGATGC CATCGCCAAT CGCGCGGCGG TCGATGCGGC GCGTAAGCGT
CAGCAGCAGA AAAACAAGGA CGGCAAAGGC CAGACCAAGG ATCAGAAGCA ATCTGTTCAG
GATGGGAAGG GGCAGCAGCA GTCGGGTCAG CCTCAGCACA ACCCGCAAGC CGGCCAGGAT
GGGCACAACC AGCAGGACGG CAAGAACCAG CCCTCTGATG CGCAGACGCC GCAGGACGGC
ACGTCGCAGG ATGCGCAGTC CAAGAATGCG GAGGACGCGC AACGCAAGCA GGACACGCCG
CCACAGTCTG CCGATGCCAA GGCGCAACAG CAGGCCGATG AGGCGCAGCG TCGCAAGATG
CAGCAGGCCA TGGCGCAGGC GGGCGACAAG CAGGCAGATG CCAGCGGCAA GCAGCAGGCC
GTGGCCGCCA GCGAAACGCC GGAACAGCGC GAGCAACGCG AGGCGGTGGA TGCATGGCTG
CGGCGGGTGC CGGACGATCC GGGCAGCCTG CTGCGCACCA AATTCAGGCT TGAATACGAA
CGCAGGCAAC GGGACGGACG ATGA
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| Protein sequence | MAMNALTELA GPLQALHLLR PTLLLALLAI VPAAALWHWR RRDTDVWRQS VDAHLLSTLL
VAGGRRGWLG FVLAALTYTL AVVAMSGPSW RQTERPVYQT SMPLVVVLDL SSSANATDLP
PSRLLQARAK LATLLRKRAG GEVALLVYAG ESFTVAPLTE DSANVALFLD ALSPSVMPVD
GKRADRGIDA AAQLLQQAGF KQGEILLVSD GADRSAESAA RTARSRGFTV SALGMGSERG
AAYRMASGEI AQAKLDEGSL RDLAGQGGGR YARIAPDDAD LRALGVLDPS QQPLADETAE
SDGGKTWLDE GYWLVLPVML LALLAFRRRA VVAVLAMVCV LPFAQPARAA DGTLWQRADQ
LQQQRLDAGV QAYRKGDFAA AQKAFEAVPT DEGLYNLGNA LARQGQYDAA IDAYDRALKQ
HPNQQDAIAN RAAVDAARKR QQQKNKDGKG QTKDQKQSVQ DGKGQQQSGQ PQHNPQAGQD
GHNQQDGKNQ PSDAQTPQDG TSQDAQSKNA EDAQRKQDTP PQSADAKAQQ QADEAQRRKM
QQAMAQAGDK QADASGKQQA VAASETPEQR EQREAVDAWL RRVPDDPGSL LRTKFRLEYE
RRQRDGR
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