| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02185 |
|---|
| Symbol | |
|---|
| ID | 6307494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 4094183 |
|---|
| End bp | 4094956 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642641233 |
|---|
| Product | PspA/IM30 family protein |
|---|
| Protein accession | YP_001915081 |
|---|
| Protein GI | 188578152 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTT TTTCCAAGCT GATCACGCTG CTGCGTGGTA CCGCACACGA AACCGGCCAG
AAGGCCGTCG ACGCCAATGC GCTGCGCATC CTGGACCAGG AAATGCGCGA TGCCGGCGCC
CAGCTCACGC GCTCGCGCGA AGAGCTCACC AAGCTGATGG CGCAGAGCAA GCTGGCCCAG
CAGAAGATCG ACGCGCGCGC CGGCAAGATG GCCGAGTACA CGCGTTACAT CGAAGGCGCG
TTGGCCAAGA ACGATGAAGC GCTGGCGCAC GAGGTGGCGG TCAAGCTGGC CGCGCTGGAA
AGCGAGGATG CCGGCGACAA GGCGGCCAAG ACCGCGCTGG ACCAATCGGT GGTGACGCTC
AAGGCGACCA TCCAGAAGAC CGAAAACCAG CTGCGCGGCA TGCGTCAGCA GATCGATACG
GTCAAGGCCA CCGACGCGGT GCAGAAGGCG CAGGCCGCCA TCGCCGCGCG CCATTCCGGC
GCCAGCAGCA AGATGGGCTC GGCGCTGGAA TCGCTGGAGC GCATCAAGGC GCGTCAGGCC
GAAACCTCGG CACGCATCGC ATCGGCCGAA GAGCTCGAAT CGTCCACCGG CGATGGCGAT
CTCAATCGGC GTCTGGCGGC GGCCGGCCTG ATGGAAGGCG AATCCAACGC CGCTGCGGTG
CTGGCACGCT TCAAGAAGCC GGCCGCGCAG CTGGGCCACG AGAACACCAG TGGCAGCGCG
CCGTTGATCG GCCAGGTGCG CGACGTGCAG CAGGTTCCGC GCAGCGACAG CTGA
|
|---|
| Protein sequence | MSIFSKLITL LRGTAHETGQ KAVDANALRI LDQEMRDAGA QLTRSREELT KLMAQSKLAQ
QKIDARAGKM AEYTRYIEGA LAKNDEALAH EVAVKLAALE SEDAGDKAAK TALDQSVVTL
KATIQKTENQ LRGMRQQIDT VKATDAVQKA QAAIAARHSG ASSKMGSALE SLERIKARQA
ETSARIASAE ELESSTGDGD LNRRLAAAGL MEGESNAAAV LARFKKPAAQ LGHENTSGSA
PLIGQVRDVQ QVPRSDS
|
|---|
| |