| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02179 |
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| Symbol | hemE |
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| ID | 6307500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 4098551 |
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| End bp | 4099615 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642641239 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001915087 |
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| Protein GI | 188578158 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAGA ACGATCGCCT GCTGCGCGCC CTCAACCGTC AGCCCGTGGA CCGCACCCCT
GTCTGGTTGA TGCGCCAGGC CGGCCGCTAT TTGCCGGAAT ACCGTGCCAC CCGCGCGCGC
GCCGGCAGCT TCCTGAGCAT GGCCAAAAAC CCGGACATCG CCTGCGAAGT GACCCTGCAG
CCGCTGCAAC GGTTTCCGCT GGATGCGGCG ATCCTGTTCT CCGACATCCT GACCATCCCC
GATGCGATGG GCCTGGAGCT GTATTTCGTC GAAGGCGAAG GCCCCAAGTT CCGCCACCCG
GTGCGCGATG CCGCCGCAAT CCACCGCCTG GGCGTGCCGG ACATGGAAAC CGAGCTGCGC
TACGTGATGG ATGCCGTGCG CGTGATCCGC CGCGAGCTGG ACGGCTCCGT GCCGTTGATC
GGTTTCTCCG GCAGCCCGTG GACGCTGGCC TGCTACATGA TCGAAGGCGG CGGCAGCAAG
GAATACGCAC GCATCAAGGC AATGGCCTTC AACGCACCAG AGGTGCTGCA TCACCTGCTC
GGCACCGTGA CCGACGCGGT GATCGCCTAC CTGGCCGCAC AGCGCGCCGC CGGTGCGCAG
GCGCTGCAGG TGTTCGACAC CTGGGGCGGC GTGCTCTCGC CGGCGATGTA CCATGAATTC
TCGCTGCCCT ACCTCACCCG CATCGCGCAT GAGCTGGAAC GCGGTGAAGG CGCCGAGCGC
ACGCCGCTGG TGTTGTTCGG CAAGGGCAAT GGCGCCTATG TGGCCGATCT GGCCGCCAGC
GGCGCCGAAG CGGTGGGCGT GGACTGGACC ATCTCACTGG CCGACGCCGC GCAGCGCGCA
GGCGGCCGTG TCGCCCTGCA GGGCAACCTC GACCCGGCCA CCCTGTACGG CTCGCCCGAG
GCCATCCGCA CCGAAGTCGG CAAGACCCTG GACAGCTATG CGCAAGGCAA TGGCGGCTCG
CGCGAAGGCC ACGTCTTGAA CCTCGGCCAC GGCATGTCGC CGGATATGAA TCCGGAGCAT
GTGGGCGTAC TGGTGGAAGC GGTGCAGCGT TTGAGCAAGC GGTAA
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| Protein sequence | MLKNDRLLRA LNRQPVDRTP VWLMRQAGRY LPEYRATRAR AGSFLSMAKN PDIACEVTLQ
PLQRFPLDAA ILFSDILTIP DAMGLELYFV EGEGPKFRHP VRDAAAIHRL GVPDMETELR
YVMDAVRVIR RELDGSVPLI GFSGSPWTLA CYMIEGGGSK EYARIKAMAF NAPEVLHHLL
GTVTDAVIAY LAAQRAAGAQ ALQVFDTWGG VLSPAMYHEF SLPYLTRIAH ELERGEGAER
TPLVLFGKGN GAYVADLAAS GAEAVGVDWT ISLADAAQRA GGRVALQGNL DPATLYGSPE
AIRTEVGKTL DSYAQGNGGS REGHVLNLGH GMSPDMNPEH VGVLVEAVQR LSKR
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