| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02019 |
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| Symbol | |
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| ID | 6307297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 3900672 |
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| End bp | 3902156 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642641041 |
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| Product | Putative signal protein with GGDEF domain |
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| Protein accession | YP_001914889 |
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| Protein GI | 188577960 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGTCAA CAACCAAGCG GCGACGGCAA CGTGCACAGC GCATCGCGCT GCATTTCGTG
CTGACCGCCT CCTGCATGCT GCTGCTCGGT TCGGAGTACT GGTCCATCCA TGAGGAGCGC
GCGACTGCGC TGCGCAGCGC CCAGGCGCAG TCATTGAATC TGGCCAACTC CCTGGCGCAA
CATGCCAGCG ACACCCTGTC GATTGCCGAC GCGGTGCTAT CCGGGCTGGT GTCGCGGGTT
GAACACGACA AGCGCTCCAG TGCCGCGCGT TCGGCAATGC ATGAGTTTCT GGTAAGCGAA
GCGCGCCGCT CGGATCGCCT GCATGGCATT TTCATCTATG CAGCGGATGG CAGTTGGGTG
AGCTCGTCTC TCGACAGCAC GCCCAGGACA CACAACAACG CCGATCGCGC GTATTTCAAA
TATCATCGCG ACCATCGCGA CGCCATGTCG CTGGTCGGCC CGCCCGTGCA AAGCCGCTCG
GACGGCTCCT GGGTGATCAC GTTGAGCCGC CGCGTCAATA CCCCCAGCGG CGAGTTCGCC
GGCGTGGTGC TGGTCACCCT GCAGTTGAAG TATTTCCAGA ACTACTACAG CACCTTCGAA
GTCGGCCCGC ACGGCACCAT CGGCATGACC AACGACGATG GCATCGTGCT AGTGCGCCGG
CCCGACAAAC AGGGCGTGAT CGGCACCTCG ATCGCAGGCA CGTCGATCTA CGTCACCGTG
CGCGCGCGCA AGCACGGCAC CGCCACCTAT CGCTCACCGA TCGACGGCGT GGAGCGCATC
TCCGGCTTTG CACCGGCGCG GCCGTATCCG CTGACCGTGC TGACCGGCGT TTCGGTCGAC
GATGCGTTGG CGAACTGGCG GGAAACGGCG CGTCAGCGCA TCGTCGTGGC GGCGCTGGGC
TGTGCGCTGC TATTGGGCGT AGGGATCTGG CTGGACCTGC AACTGCGCCG CATGCATCGT
AACGAAGCCC AGCTGAGCAC CGAAGCCTGG GTGGACGCAT TGACCGGCAT CGCCAACCGG
CGCGCCTTCG ACGACCGGCT CTCGCGTGCA TTGCAGGACG CAATTCGCCT TGAGGCGCCA
TTGTCGGTGC TGATGATCGA TGTCGACCAC TTCAAGCTCT ACAACGACAC CTATGGCCAC
GTGAACGGCG ACGCCTGCCT GCGCGTGATT GCCGGCACGA TTGCGGCCTG CTCGCGACGC
AGCGAAGACG TGGCCGCGCG CTACGGCGGC GAAGAGTTCG GCATGATCCT GCCGCACACC
GATGCCGCTG GCGCGCTACG CTTGGCAGAC GCAGTGCGCA ATGCAGTTGC CGAGCTCGGT
CTGATGCACT TGTCCAGCCC TACCAGCGCG CATGTCACCG TCAGTATCGG CGTAGCGACC
TTCGAACCGG GCGAAGCGCC GCTGAGCCCC AACGCCATCG TGCACGACGC CGATTCGGCG
CTGTATCGCG CCAAGCAGAA AGGGCGGAAT CGGACGTCGG CTTAG
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| Protein sequence | MTSTTKRRRQ RAQRIALHFV LTASCMLLLG SEYWSIHEER ATALRSAQAQ SLNLANSLAQ
HASDTLSIAD AVLSGLVSRV EHDKRSSAAR SAMHEFLVSE ARRSDRLHGI FIYAADGSWV
SSSLDSTPRT HNNADRAYFK YHRDHRDAMS LVGPPVQSRS DGSWVITLSR RVNTPSGEFA
GVVLVTLQLK YFQNYYSTFE VGPHGTIGMT NDDGIVLVRR PDKQGVIGTS IAGTSIYVTV
RARKHGTATY RSPIDGVERI SGFAPARPYP LTVLTGVSVD DALANWRETA RQRIVVAALG
CALLLGVGIW LDLQLRRMHR NEAQLSTEAW VDALTGIANR RAFDDRLSRA LQDAIRLEAP
LSVLMIDVDH FKLYNDTYGH VNGDACLRVI AGTIAACSRR SEDVAARYGG EEFGMILPHT
DAAGALRLAD AVRNAVAELG LMHLSSPTSA HVTVSIGVAT FEPGEAPLSP NAIVHDADSA
LYRAKQKGRN RTSA
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