| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01994 |
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| Symbol | |
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| ID | 6307318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3920630 |
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| End bp | 3921760 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642641062 |
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| Product | twitching motility protein |
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| Protein accession | YP_001914910 |
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| Protein GI | 188577981 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.460173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA TCGACTTCAC CTCCTTCCTC AAGCTGATGG CGCATCAGAA GGCGTCGGAC
CTGTTCATCA CCTCGGGGAT GCCGCCGGCG ATCAAGGTGA ATGGCAAGAT CAGCCCGATT
ACCCAGACGC CGCTGACTGC GCAGCAGAGC CGCGATCTGG TGTTGAACGT GATGACTCCC
TCGCAGCGCG AGGAATTCGA AAAGACCCAC GAGTGCAACT TCGCCATCGG CGTTTCAGGG
GTGGGGCGTT TTCGTGTGAG CTGTTTCTAC CAGCGTAATC AGGTCGGTAT GGTGCTGCGC
CGGATCGAAA CGCGCATCCC CACCGTGGAC GAGCTGAGCC TGTCTCCGGT GATCAAGACG
CTGGCGATGA CCAAGCGCGG CATCGTCATC TTCGTCGGCG CCACCGGTGC CGGTAAGTCG
ACCTCGCTGG CGGCGATGAT CGGCTACCGC AACCAGAATT CCACCGGCCA CATCATCACC
ATCGAAGACC CGATCGAATT CGTGCACAAG CACGAGGGCT GCATCATCAC CCAGCGCGAG
GTCGGCATCG ATACCGACAG CTGGGAAAAC GCGCTGAAGA ACACCCTGCG CCAGGCGCCG
GACGTGATCA TGATCGGCGA GGTGCGTACC CGCGAGGGCA TGGACCACGC GATCGCCTTC
GCCGAAACCG GCCACCTGGT GCTGTGCACG CTGCACGCCA ACAACGCCAA TCAGGCGATG
GACCGCATCA TCAACTTCTT CCCCAAAGAC CGCCGCAATC AGCTGCTGAT GGACCTGTCG
CTCAATCTCA AGGGCGTGGT GGCGCAGCAG CTGATTCCGA CGCCGGATGG CCGCAGCCGT
CGCGTGGCGA TGGAAATCAT GTTGGGCACG CCGCTGGTGC AGGACTACAT CCGCGACGGC
GAAATCCACA AGCTCAAGGA GATCATGAAG GAGTCCACCA ACTTGGGCAT GCGCACCTTC
GACCAGAGCC TGTTCGAGCT CTACCAGGCT GGCGAAATCA GCTACGAAGA CGCATTGCGC
TACGCCGACT CGCAGAACGA AGTGCGCTTG CGCATCAAGC TCTCGCAGGG GGGCGATGCC
AAGACCTTGT CGCAGGGCAT GGATGGTGTG GAGATTTCCG AAGTTCGATA A
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| Protein sequence | MSTIDFTSFL KLMAHQKASD LFITSGMPPA IKVNGKISPI TQTPLTAQQS RDLVLNVMTP
SQREEFEKTH ECNFAIGVSG VGRFRVSCFY QRNQVGMVLR RIETRIPTVD ELSLSPVIKT
LAMTKRGIVI FVGATGAGKS TSLAAMIGYR NQNSTGHIIT IEDPIEFVHK HEGCIITQRE
VGIDTDSWEN ALKNTLRQAP DVIMIGEVRT REGMDHAIAF AETGHLVLCT LHANNANQAM
DRIINFFPKD RRNQLLMDLS LNLKGVVAQQ LIPTPDGRSR RVAMEIMLGT PLVQDYIRDG
EIHKLKEIMK ESTNLGMRTF DQSLFELYQA GEISYEDALR YADSQNEVRL RIKLSQGGDA
KTLSQGMDGV EISEVR
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