Gene PXO_01987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01987 
Symbol 
ID6307325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp3927464 
End bp3928078 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content68% 
IMG OID642641069 
Productpeptidase 
Protein accessionYP_001914917 
Protein GI188577988 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.517846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGATC CGCCGAACAC CCCGCCATCG TCGCCATACG CGTCCGCCAC ACGCAGCCCC 
GCTCGCCGCG TGCGCAGTGT CGTGGTCTGG ATTGCGCTGC TGTGCGCTCT GGCGGTGGCC 
GCGCGCTGGG CCTGGCATCT GCCGATCGCC CATCAACTCC CTACCAGTTG GGAGCTGTCG 
CAGATGCCGC CGCCTGCGCA ATTGCATCTC CACGTGGAAG GTGTGCGTGC ACGGCAGATT 
GCCGACACCT TTGGTGCACC GCGTGGCCGC GACCGTACGC ATGCCGGCGT GGATATCTTC 
GCACCACGTG GCACGGCGGT GGTGGCTGCA ACGCGCGGCG TGGTCAGCGC CATCCGCGAC 
CAGGGCCTGG GCGGAAAACA GGTCTGGCTC CTAGGTCCAG CGATGGAGCG GCATTACTAC 
GCGCAGCTGG ACGATTGGGC TGCCGGCCTT GCGGTAGGCG ATGTGGTCGA GCCCGGCACA 
CCGCTCGGCA TGGTCGGCAC CACCGGCAAC GCGCGCGGCA CGCCGCCGCA CCTGCACTAT 
GGTGTCTATG GACGCAACGG TGTGTACGAT CCGCTGCCGC TCCTGCGCAA ACCCGCACCA 
CAGCCGGAAA ATTGA
 
Protein sequence
MTDPPNTPPS SPYASATRSP ARRVRSVVVW IALLCALAVA ARWAWHLPIA HQLPTSWELS 
QMPPPAQLHL HVEGVRARQI ADTFGAPRGR DRTHAGVDIF APRGTAVVAA TRGVVSAIRD 
QGLGGKQVWL LGPAMERHYY AQLDDWAAGL AVGDVVEPGT PLGMVGTTGN ARGTPPHLHY 
GVYGRNGVYD PLPLLRKPAP QPEN