| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01794 |
|---|
| Symbol | |
|---|
| ID | 6306523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 3094545 |
|---|
| End bp | 3095942 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642640277 |
|---|
| Product | S-methylmethionine transporter |
|---|
| Protein accession | YP_001914134 |
|---|
| Protein GI | 188577205 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0833] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.236866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGAAC CATCGTCCAC CACCGCCCCG CAGTTCCGGC GCAGCATGCA GGTGCGCCAT
CTGGTGATGC TGTCGCTGGG CGGCGTGATC GGTACCGGCT TGTTCTTCAA TACCGGGTAC
ATCATTGCCA GCACCGGCGC GCTGGGCACG GTGCTCGCAT ATCTGATCGG CGCGTTGGTG
GTGTACCTGG TGATGCAATG CCTGGGCGAG TTGGCGGTGG CGATGCCGCA GACCGGCGCA
TTCCACGTGT ATGCCGCGCG TTATCTGGGG CCGGCGACCG GCTACGTGGT TGCGTGGTTG
TACTGGCTGA CCTGGACGGT GGCATTGGGC TCGAGCCTAA CCGCAGCGGC GTTCTGCATG
CAGTACTGGT TTCCGCATAG CCCGGCGTGG CCGTGGTGTC TGCTGTTCTG CGCGCTGATC
TTCGGTTTGA ACACGGTCTC GGCGCGCTGG TTTGCAGAAG GCGAGTTCTG GTTTTCGTTG
ATCAAGGTCA TCACCATCCT GGTGTTCATC GTGCTTGGCG GTGCGGCGGT GATCGGTCTG
CTGCCACTGG CCGATGGTTC GCCTGCACCC GGGCTGCGTC ATCTACGTGC CGATGGCTGG
TTTGCGCATG GAACGCTGCC GATCCTGATG ACGATGGTGG CAGTGAATTT TGCATTTTCC
GGCACCGAGT TGATTGGTGT GGCCGCCGGC GAAACCGAGC AGCCAGCGCG CGCGATTCCG
CTGGCGATCC GCACAACGCT GATGCGGCTG GTGGTGTTCT TCGTCGGCAC GGTGCTGGTG
CTGGCAGCGC TGCTGCCTGC CGAACAAGCG GCAGTGGAGA CGAGCCCGTT CGTGCGCGCC
TTCGAGCTGT TGGGCATTCC GTATGCGGCC GACCTCTTGA ATGTGGTGAT CCTCACCGCG
ATCCTGTCGG CGGCCAATTC CGGCCTGTAT GCGGCCGCGC GCATGCTGTG GTCGTTGGCC
AACGAAGGCA CGTTGCCTTC GGGCCTGACG CGGTTGACCG GCCGCGGCAT TCCGTTGCGC
GCCGTGTCGT TGAGCATGTT GGGTGGCTTG CTGGCGCTGC TCACGGGCGT GTATGCGGCC
GACACCGTGT TCGTTGCGAT CTCGGCGGTT TCGGGGTTTG CGGTGGTGGT GGTGTGGCTG
AGCATCTGCG CGTCGCACTA TGTGTTTCGT CGCCAGCTGC TGCGCGATGG CGTTGCGCCA
GAGACGCTGG CGTACCGCGC GCCGTGGTAT CCATGGACAC CGATCCTCGG CTTTTCGCTG
TGTCTGCTGG CCTGTATCGG GCTGGCATTC GATCCGCAGC AGCGCATCGC GTTGTGGTGC
GGCGTTCCGT TCGTTGCGCT GTGCTACGGC GCTTACGCAC TTACCCAACG GCTTGCGGCC
CGGAGACTGC ACGCATGA
|
|---|
| Protein sequence | MPEPSSTTAP QFRRSMQVRH LVMLSLGGVI GTGLFFNTGY IIASTGALGT VLAYLIGALV
VYLVMQCLGE LAVAMPQTGA FHVYAARYLG PATGYVVAWL YWLTWTVALG SSLTAAAFCM
QYWFPHSPAW PWCLLFCALI FGLNTVSARW FAEGEFWFSL IKVITILVFI VLGGAAVIGL
LPLADGSPAP GLRHLRADGW FAHGTLPILM TMVAVNFAFS GTELIGVAAG ETEQPARAIP
LAIRTTLMRL VVFFVGTVLV LAALLPAEQA AVETSPFVRA FELLGIPYAA DLLNVVILTA
ILSAANSGLY AAARMLWSLA NEGTLPSGLT RLTGRGIPLR AVSLSMLGGL LALLTGVYAA
DTVFVAISAV SGFAVVVVWL SICASHYVFR RQLLRDGVAP ETLAYRAPWY PWTPILGFSL
CLLACIGLAF DPQQRIALWC GVPFVALCYG AYALTQRLAA RRLHA
|
|---|
| |