| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01401 |
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| Symbol | gumK |
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| ID | 6306909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3502281 |
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| End bp | 3503477 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642640656 |
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| Product | exopolysaccharide xanthan biosynthesis glucuronosyltransferase GumK |
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| Protein accession | YP_001914510 |
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| Protein GI | 188577581 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.944331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA CACCCGCCGC CGCTTCCGGC ATCCGCCGGC CTTGCTATCT GGTCTTGTCC
GCCCACGATT ACCGCACGCC GCGGCGCGCC AATATCCATT TCATCACCGA TCAACTGGCG
CTGCGTGGAA CCACGCGGTT TTTCTCGCTG CGCTATAGCC GGTTGTCGCG CATGAAGGGG
GATATGCGGT TGCCGCTCGA CGAGACTGCC AACACGGTTG TCTCGCATAA GGGCGTCGAC
TGCTACCTGT GGCGTACGAC GGTGCATCCG TTCAATACGC GCCGTCCGTG GCTGCGTGCG
CTCGAGGATG CGATGTTCCG CTGGTACGCT GCGCACCCGC CACGCCAACT GCTCGACTGG
ATGCGCGAGT CGGATGTGAT CGTCTTCGAA AGTGGCATCG CGATTGCTTT CATCGAGCTG
GCAAAACGCG TCAATCCGGC GGCGAAGCTG GTCTATCGCG CCTCTGACGG GCTGAGCACG
ATCAATGTGG CGTCCTACAT CGAACGCGAG TTCGACCGCG TCGCGCCCAC GCTCGATGTG
ATCGCACTGG TGTCGCCGGC AATGGCAGAA GAGATCGCCA GCCGCGACAA CGTCTACCAC
GTCGGGCATG GCGTGGATCA CAACCTGGAC CAACTTGGCG ATCCCTCGCC GTACGGCGAG
GGAATCCATG CAGTCGCGGT CGGTTCGATG CTGTTCGACC CGGAGTTCTT CGTGGTTGCC
AGCAAGGCTT TTCCGCAGGT GACGTTTCAC GTGATCGGCT CGGGCATGGG CCGGCATCCC
CGCTATGGCG ATAACGTCGT GGTCTATGGC GAAATGAAGC ACGCCGAGAC GATTGGTTAC
ATCAAACACG CACGTTTCGG AATTGCGCCG TACGCGTCCG AGCAGGTGCC GGTGTACTTG
GCTGATAGTT CGATGAAGTT GTTGCAATAC GATTTCTTCG GATTGCCTGC GGTATGTCCG
AATGCGGTGG TCGGGCCGTA TCAATCGCGT TTCGGCTACA CCCCAGGCAA CGCTGATTCC
GTTATTGCGG CAATTGGCCG CGCATTGGAA GCACCGCGCG TACGTTATCG CCAGTGCCTG
AATTGGTCCG ACACCACCGA TCGCGTGCTG ACTCCCAGCG CGTATCCGGA AACCCGTCTG
TATCCACAGC AAGGCGCAGC AGTGCACGCC TCGTCAGAGG CTGTGCTCTC GCATTGA
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| Protein sequence | MSDTPAAASG IRRPCYLVLS AHDYRTPRRA NIHFITDQLA LRGTTRFFSL RYSRLSRMKG
DMRLPLDETA NTVVSHKGVD CYLWRTTVHP FNTRRPWLRA LEDAMFRWYA AHPPRQLLDW
MRESDVIVFE SGIAIAFIEL AKRVNPAAKL VYRASDGLST INVASYIERE FDRVAPTLDV
IALVSPAMAE EIASRDNVYH VGHGVDHNLD QLGDPSPYGE GIHAVAVGSM LFDPEFFVVA
SKAFPQVTFH VIGSGMGRHP RYGDNVVVYG EMKHAETIGY IKHARFGIAP YASEQVPVYL
ADSSMKLLQY DFFGLPAVCP NAVVGPYQSR FGYTPGNADS VIAAIGRALE APRVRYRQCL
NWSDTTDRVL TPSAYPETRL YPQQGAAVHA SSEAVLSH
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