| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01399 |
|---|
| Symbol | gumI |
|---|
| ID | 6306911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 3505053 |
|---|
| End bp | 3506102 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642640658 |
|---|
| Product | exopolysaccharide xanthan biosynthesis glycosyltransferase GumI |
|---|
| Protein accession | YP_001914512 |
|---|
| Protein GI | 188577583 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.490868 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC TGGCCTCTCC GTCGATGACC CGTGCGGCAA CCCAGCCGCA GGTCACGGTG
CTGTTTTCCA CCGAAAAACC CACCGCCAAC ACCAACCCGT ACCTGACCCA GCTCTACGAC
GCGTTGCCCG CCGCAGTGCA TCCGCGTTTT TTTTCGATGC GCGATGCTTT GTTGTCGCGC
TACGACGTGT TGCACCTGCA TTGGCCCGAA TACTTGCTGC GCCATCCAAC TGCTGCAGGC
ACCTTGGCCA AGCAGGTCTG TGCTGCATTG TTGTTGCTCA AGCTGCAGCT GACCGGCACG
CCGGTGGTGC GCACCCTGCA CAATCTTGCA CCGCATGAAG ACCGCGGTTG GCGCGAACGG
AGCCTGCTGC GCGGGATCGA CCGGCTGACA CGTCGCTGGA TCCGCATCAA TGCGACTACG
CCGCCGCGTC CGCCGTTCAC CGATACGATT CTGCACGGCC ACTATCGCGA CTGGTTCGCA
ACGATGGAGC AGAGCAGCAC GGTGCCGGGG CGGTTGCTGC ACTTCGGCCT GATTCGCCCG
TATAAAGGCG TCGAAACGCT GCTGGAGGTC ATGCACAAGG TCGACGATGC GCGCGTGACT
CTACGCATCG TCGGCAACCC GGCCACGCCG CAGATGCGCA GCTTGGTGGA GGACGCCTGC
ACGCAGGATC CGCGCATCAG CGCTTTGCTG GCCTATGTGG AAGAGCCGGT GCTGGCACGC
GAAGTCAGCG AGGCTGAGCT GGTGGTGTTG CCGTATCGGC AGATGCATAA CTCCGGCACC
TTGCTGCTGG CGTTGTCGCT GGCGCGCCCG GTGCTGGCGC CGTGGAGCGA ATCGAATGCA
TCCATCGCCG AGGAAGTCGG ACCTGGGTGG GTGTTCCTGT ATGAAGGCGA GTTCGATGCG
CCGCTGCTGA CCGGCATGCT CGACAAGGTG CGCGCCGCAC CGCGCGGGCC GGTACCGGAT
CTTTCGCAGC GCGACTGGCC ACGGATCGGG CAGTTGCATT ACCGCACCTA TCTGGAAGCG
CTGGGCAAGG ACGGAGACGC CGCGCTGTGA
|
|---|
| Protein sequence | MSALASPSMT RAATQPQVTV LFSTEKPTAN TNPYLTQLYD ALPAAVHPRF FSMRDALLSR
YDVLHLHWPE YLLRHPTAAG TLAKQVCAAL LLLKLQLTGT PVVRTLHNLA PHEDRGWRER
SLLRGIDRLT RRWIRINATT PPRPPFTDTI LHGHYRDWFA TMEQSSTVPG RLLHFGLIRP
YKGVETLLEV MHKVDDARVT LRIVGNPATP QMRSLVEDAC TQDPRISALL AYVEEPVLAR
EVSEAELVVL PYRQMHNSGT LLLALSLARP VLAPWSESNA SIAEEVGPGW VFLYEGEFDA
PLLTGMLDKV RAAPRGPVPD LSQRDWPRIG QLHYRTYLEA LGKDGDAAL
|
|---|
| |