Gene PXO_01346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01346 
Symbol 
ID6306966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp3555266 
End bp3555829 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content66% 
IMG OID642640713 
Productphage-related baseplate protein 
Protein accessionYP_001914565 
Protein GI188577636 
COG category[R] General function prediction only 
COG ID[COG4540] Phage P2 baseplate assembly protein gpV 
TIGRFAM ID[TIGR01644] phage baseplate assembly protein V 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.261049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAACG CATCCTCCGC ACTGAGTAAC GCCATTCGCC TCGGCACGGT TGCCGAGGTG 
AATCTCGCCA CCGCGCGATG CCGCGTGCAG GTCCGCGAGA TGATGACCGA CTATCTGCCT 
TGGCTAGTCA CACTGACCGG CACAACCATC ATCTGGTCGG CGCCAGCGAT CAGCGAACAA 
GTCGTGGTGC TCTCGCCGGC CGGCGACCTG GCCGATGGCC TGGTGCTACG CGGTCTTTAC 
TCCGACCAAT TCACAGCGCC CGCCACGTCC GACACACTGC ACATGCTGCG CTTTGCCGAT 
GGCGCGCAGC TGCAATACGA CACCGACACG CATGCGCTGC AGGCGACACT GCCCAGCGGC 
GGCACTGCAA CCATCACCGC CGATGGCGGC ATCACGCTCA ACGGCCCGCT GACGGTCAAC 
GGCACCACGC AGATCAACGG CGATGTCGGC ATCACCGGCA CGGCCACGGT CGACATCGAC 
GTGCTTGGCG GCGGGATCAG CCTCAAGCAC CACAAGACCA CCGGCGTGAC TGCCGGCAGC 
GCGCTCAGCG GTGTCCCGCA GTGA
 
Protein sequence
MGNASSALSN AIRLGTVAEV NLATARCRVQ VREMMTDYLP WLVTLTGTTI IWSAPAISEQ 
VVVLSPAGDL ADGLVLRGLY SDQFTAPATS DTLHMLRFAD GAQLQYDTDT HALQATLPSG 
GTATITADGG ITLNGPLTVN GTTQINGDVG ITGTATVDID VLGGGISLKH HKTTGVTAGS 
ALSGVPQ