Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01323 |
Symbol | pilX |
ID | 6306992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3576337 |
End bp | 3576774 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642640739 |
Product | PilX |
Protein accession | YP_001914590 |
Protein GI | 188577661 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4726] Tfp pilus assembly protein PilX |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.153323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGATCC TATTGGCGTT GATCGGGATC GCCGGCATGC AGGTGGCAGG GATGCAGGAG AAAATGGCGT CCAATTATCT GGTGACCAAC ATCGCCTTCC AGAATGCCGA GGGCGTGACG CGTAGGAGCG AGCGGGCGAT TGAAGCCATC GCCAATCGCA AGAGCGCTCC CAGCGACGCA ACGGTTGCGG ATACTGATAT CCAGCAAAAC TGTGATACCG CATTCGATCC GGTGGCCTGG GCACGTAATA AGGCTGTGTC GGTGCATGAG GCGGTCAATG TGCGGCGCAT CGAATCATGC ATCATCGGGG GAGGCTCGCT CGCGATGGGC AATACGGTAG ATCCGGTAAC TCCCGTATAT CAAATCACCA CCTTCGCCAA CGATGCGACG ACGGATGCAT CTTCGTCGGC GTCGATTGAC TCCATCTTCA AGCTCTGA
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Protein sequence | MLILLALIGI AGMQVAGMQE KMASNYLVTN IAFQNAEGVT RRSERAIEAI ANRKSAPSDA TVADTDIQQN CDTAFDPVAW ARNKAVSVHE AVNVRRIESC IIGGGSLAMG NTVDPVTPVY QITTFANDAT TDASSSASID SIFKL
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