| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01200 |
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| Symbol | jmjC |
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| ID | 6306409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2971198 |
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| End bp | 2972694 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642640165 |
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| Product | transcription factor jumonji, JmjC |
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| Protein accession | YP_001914022 |
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| Protein GI | 188577093 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2850] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGTAC GTAAAGCGAC CCCACTTGCC ATCGAAGTAC AGGCCCGTCC GGGACAGCCG
CTGGGCATGC CGGTCGAGCG TTTCCTGCGC AATTACTGGC ACAAGCACCC GCTGTTGATC
CGCAACGCGT TCGCGGATTT CGCCTCGCCG CTGCAGCCGG AAGACTTGGC CGGGCTGGCC
TGCGAAGATG GCGTGCTGGC GCGCCTGATC AGCCACGACC GCGCCACCGA CAGCTGGGAC
GTGCGCAGCG GCCCGTTCCA GGAAACCGAT TTCCCCGGCC TGCCCGACCA TGACTGGACC
TTGCTGGTGC AGGACGTGGA CAAATGGGAC GCCGATGTGC GCGCCCTGCT GGAGCAGTTC
CGCTTCCTGC CGCGCTGGCG CATCGACGAC ATCATGATCA GCTTCGCCGC CACCGGCGGT
TCGGTCGGTG CGCATGTCGA CCATTACGAC GTGTTCCTGC TGCAGGGCCA GGGCCACCGC
CGCTGGCAGA TCGACGCGCG CACCGCGCAG GGCAGCAAGG CCACCCCGCT GGCGTTCCGC
GAGGATGTGG AGCTCAAGCT GCTGCGCACG TTCAAACCCA CCCACCACTG GGTGCTGGGT
CCGGGCGACA TGCTGTATCT GCCGCCGCTG ATCCCGCACC ACGGTGTGGC CGAAGACGCC
TGCCTGACGT TTTCCATCGG CACCCGCGCG CCATCGTCGG CCGAGCTGAT CGGCGATTAC
CTGGATACGT TGATCGCCGA TGCCGACGAG GCCGTGCGCT ATCACGACGA AGACCTCAAG
GTGCCGGCCG ACCCGTACGA GATCGACGTC ACCGCCATGA ACCGCGTGGT CGCAGCGCTC
AATGCGTTAC GCATGAACGA CCCCGATCGC CTGGGCGACT GGTTCGGCCG TTTCATGACC
ACCTACCGCG CCTGCGGCGA CGTGGTGCCG GCGCCAGCAC CCATCCCGCG CGAAGCGGTC
GAGCAGGCGC TGGAAGAAGG CGTGCTGCTG CATCGCCACC CGTGGTCGCG GCTGGCCTGG
CGGCGCGCCA AGCGCGGCGC CACGCTGTTC TGCAGCGGCC TGGAGTTTGC GCTGTCGGCC
AAGGACGCGT CCCGCCTGGC CGCGGCCGAA AAGATCGACG GCACGCTGTA CGCGCAGTTG
TCGCCGCGTG GCCGTGACGT CGTGCTGGAA CTGCTGGCAC AGGGCCATTA CCAGCGCGCC
CACGAAGACG CCGATGGGGA TATCGCAGAC GAGAACCACG CGCATGCCCT GAGCGTGTCT
TCCGACCACG ACGATGCAGA CGCCGAGGAC GACGCGCCGG AAGTAGACGA CACCATCGAT
GCGGATGCTG ATGTCGCGCA AGTCGCTGAT GACGGCGGCG ACCCGGCAGA GACGCTGGAT
GCCGGGCAGG ACGCTGTTGC CGACATCGAA GACGACGCCG CAGCCGGGCA GGACGACGCC
AGCGATAGTG CCGCCGCCGC TTCCGATGAC AGCGACGACG GCTCCAAATC CGCATGA
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| Protein sequence | MAVRKATPLA IEVQARPGQP LGMPVERFLR NYWHKHPLLI RNAFADFASP LQPEDLAGLA
CEDGVLARLI SHDRATDSWD VRSGPFQETD FPGLPDHDWT LLVQDVDKWD ADVRALLEQF
RFLPRWRIDD IMISFAATGG SVGAHVDHYD VFLLQGQGHR RWQIDARTAQ GSKATPLAFR
EDVELKLLRT FKPTHHWVLG PGDMLYLPPL IPHHGVAEDA CLTFSIGTRA PSSAELIGDY
LDTLIADADE AVRYHDEDLK VPADPYEIDV TAMNRVVAAL NALRMNDPDR LGDWFGRFMT
TYRACGDVVP APAPIPREAV EQALEEGVLL HRHPWSRLAW RRAKRGATLF CSGLEFALSA
KDASRLAAAE KIDGTLYAQL SPRGRDVVLE LLAQGHYQRA HEDADGDIAD ENHAHALSVS
SDHDDADAED DAPEVDDTID ADADVAQVAD DGGDPAETLD AGQDAVADIE DDAAAGQDDA
SDSAAAASDD SDDGSKSA
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