Gene PXO_01178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01178 
Symbol 
ID6306431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp2998358 
End bp2998789 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content64% 
IMG OID642640187 
Productcyclase/dehydrase superfamily 
Protein accessionYP_001914044 
Protein GI188577115 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0762785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTACCA TCCGTCGCAG CGCCCTGGTC GAACACAGCG CCACCTGCAT GTTCGATCTG 
GTCAATGATG TCGAAGCCTA TCCGCGCCGC TTCGGCTGGT GCGACGCTGC CCATGTGCTC
GAAAAGGACC AGGCGCATGT CGTGGCGCGC CTGGATCTGG GGCTGGGGTC GTTCCGCACC
TGGTTCACCA CCGAGAACAT CCTTGAGCGC CCCGAGCGCA TCGTCATGCA CTTGCGCGAG
GGCCCGTTCA AGCGATTGGA AGGCCTGTGG GAATTCCAGG CGCTGAGCGA GAACGCTTGC
AAGGTGAGTC TGACCCTGGA ACTGGAGACC AGCTCGCGCT TGCTGGGCCC TGCGCTGGCG
CTGGGGTTCC AGGGCCTGGC CGATCGCATG GTCAACGATT TCGTACGCGT CGCCGACCGC
GGCGAGGTCT AG
 
Protein sequence
MPTIRRSALV EHSATCMFDL VNDVEAYPRR FGWCDAAHVL EKDQAHVVAR LDLGLGSFRT 
WFTTENILER PERIVMHLRE GPFKRLEGLW EFQALSENAC KVSLTLELET SSRLLGPALA
LGFQGLADRM VNDFVRVADR GEV