Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01138 |
Symbol | |
ID | 6306474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 3038664 |
End bp | 3039134 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642640228 |
Product | protein U |
Protein accession | YP_001914085 |
Protein GI | 188577156 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0616572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAGCG CGGCAGACAC CACCACCTTC AACGTCAAGA TCGCGATCAC CAAGGCCTGC ACGATTACCG CCGCGTCCGC CACGGACGTC GACTTCGGTT CGGTACTCTC GACCTCCACG GCCAACGTCG ACGCCAACGG CAGCGTCACC GCGCAGTGCA CCGCATTGAC CCCATACAAC ATCGCATTGA GCGCGGGCGA CAATGCCGCC ACCGCCAATG ACGTCACCAC CCGCCGCATG AAGAATACCG ACCCGCTGGT GACCACCAAT AACTTCATCG CCTACCAGCT CTACCAAGAC ATCGCCCGCA GCACGGTCTG GGGCAGCACC ACCGGCACCA ATACGCTCAG CCGTACCGCC ACCGGTATCA ACCAGGTTTA CCCGGTCTAC GGCCGCGTGA CCAACCCGGC GGCCAGCAAT GCGGCGACCG GTAGCTACCA GGACACGATA ACTGCCACGA TCGTCTATTG A
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Protein sequence | MASAADTTTF NVKIAITKAC TITAASATDV DFGSVLSTST ANVDANGSVT AQCTALTPYN IALSAGDNAA TANDVTTRRM KNTDPLVTTN NFIAYQLYQD IARSTVWGST TGTNTLSRTA TGINQVYPVY GRVTNPAASN AATGSYQDTI TATIVY
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