Gene PXO_00999 details

Gene Information

• Locus tag: PXO_00999
• Symbol: fliS
• ID: 6306072
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 2608408
• End bp: 2608821
• Gene Length: 414 bp
• Protein Length: 137 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642639835
• Product: flagellar protein FliS
• Protein accession: YP_001913695
• Protein GI: 188576766
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1516] Flagellin-specific chaperone FliS
• TIGRFAM ID: [TIGR00208] flagellar biosynthetic protein FliS

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.00828362
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGGTT CCAATCGTCA ATATGCCGAG CAATATCGCA AGGTCGGCGT GGCCACCAGC 
GTGACCGAAG CCGACCCGCA CAAGCTGGTC TCGCTGCTGT TCGCCGGTGC CTGCCAGCGC 
ATCCGTCTGG CCCAGGCCTG CCTGGCGCAG GGCGACCAGG CGCGCAAGGG CAAGGCCATT 
GGTGAGGCCT GCGCAATCGT TGGTCACTTG AACGGTTCGC TCGATCACGA AGCCGGTGGC 
GAGATCGCTG GTAACCTCTC GGCCCTGTAC GACTACGTGA TGCAGCGGCT GACCGCAGCC 
AACCTGCACA ACGATGAGAC TGCGTTGACA GAAGTGCTGG ATTTGCTCAG CGAAATCGAC 
TCGGCGTGGA ACTCCATCCC CCTCGAACAA CGCGGCCTTT CCGCCGTTTC GTGA 

 

Protein sequence

MYGSNRQYAE QYRKVGVATS VTEADPHKLV SLLFAGACQR IRLAQACLAQ GDQARKGKAI 
GEACAIVGHL NGSLDHEAGG EIAGNLSALY DYVMQRLTAA NLHNDETALT EVLDLLSEID 
SAWNSIPLEQ RGLSAVS