Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00780 |
Symbol | |
ID | 6305610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 2141270 |
End bp | 2142052 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642639378 |
Product | 3-hydroxybutyryl-CoA dehydratase |
Protein accession | YP_001913245 |
Protein GI | 188576316 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0697189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCAATC ACGTCATTCT GATTGCCGAT CACGCCAGCA TCCGGACGAT TACGGTCAAC CGGCCGGACA AACTGAACGC CTTGAACCAG CAGACCATGC AGGCCCTGGA TCAGGCGTTT CAGGACGCAG CCGCTGCAGA CGACGTACGT GCAGTGATTC TCACCGGCGC TGGCCCCAAG GCGTTCGTGG CAGGCGCAGA TATCGCCGAA ATGAGTGATC TGTCGGCAAT CCAGGGCCGC GCGTTCTCGC TGCTGGGCCA GCAGCTGATG CGCCGGATCG AACGCATGCC TAAGCCGGTG ATTGCAATGA TCAATGGCTT TGCGCTCGGC GGCGGCCTAG AGCTGGCAAT GGCCTGCCAT CTGCGCATCG CCGCGACCAC CGCGCACCTG GGGCAACCGG AAATCAACCT GGGCCTGATC CCCGGCTTCG GCGGCACGCA GCGCCTGCTG CGCCTGACCG GCCGCGCGGC AGCGCTGGAA CTGTGCCTGC TCGGCCTGCC GATCGACGCG GCGCGCGCAC TGCAACTGGG CCTGGTCAAT CGCGTGGTCG AAGTGGACGC CTTGCACGAA GAAACCCTGG CGCTTGCGCA ACGCTTGGCA ACTGCAGCAC CGCTGGCACT GCGCGGCATT CTGGATGCGG TGGTGTTCGG CGGCGAGTGC GCTATGGAAG AAGGTCTGCA GCTGGAAACC GCGCAATTTG CGCTGTTGTT CGCCACCGAC GACATGCGCC AAGGCACCCG TGCGTTTCTC GACAAGCGCC CTGCTCACTT CAAGAACCGC TGA
|
Protein sequence | MSNHVILIAD HASIRTITVN RPDKLNALNQ QTMQALDQAF QDAAAADDVR AVILTGAGPK AFVAGADIAE MSDLSAIQGR AFSLLGQQLM RRIERMPKPV IAMINGFALG GGLELAMACH LRIAATTAHL GQPEINLGLI PGFGGTQRLL RLTGRAAALE LCLLGLPIDA ARALQLGLVN RVVEVDALHE ETLALAQRLA TAAPLALRGI LDAVVFGGEC AMEEGLQLET AQFALLFATD DMRQGTRAFL DKRPAHFKNR
|
| |