Gene PXO_00780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00780 
Symbol 
ID6305610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp2141270 
End bp2142052 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content64% 
IMG OID642639378 
Product3-hydroxybutyryl-CoA dehydratase 
Protein accessionYP_001913245 
Protein GI188576316 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0697189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAATC ACGTCATTCT GATTGCCGAT CACGCCAGCA TCCGGACGAT TACGGTCAAC 
CGGCCGGACA AACTGAACGC CTTGAACCAG CAGACCATGC AGGCCCTGGA TCAGGCGTTT
CAGGACGCAG CCGCTGCAGA CGACGTACGT GCAGTGATTC TCACCGGCGC TGGCCCCAAG
GCGTTCGTGG CAGGCGCAGA TATCGCCGAA ATGAGTGATC TGTCGGCAAT CCAGGGCCGC
GCGTTCTCGC TGCTGGGCCA GCAGCTGATG CGCCGGATCG AACGCATGCC TAAGCCGGTG
ATTGCAATGA TCAATGGCTT TGCGCTCGGC GGCGGCCTAG AGCTGGCAAT GGCCTGCCAT
CTGCGCATCG CCGCGACCAC CGCGCACCTG GGGCAACCGG AAATCAACCT GGGCCTGATC
CCCGGCTTCG GCGGCACGCA GCGCCTGCTG CGCCTGACCG GCCGCGCGGC AGCGCTGGAA
CTGTGCCTGC TCGGCCTGCC GATCGACGCG GCGCGCGCAC TGCAACTGGG CCTGGTCAAT
CGCGTGGTCG AAGTGGACGC CTTGCACGAA GAAACCCTGG CGCTTGCGCA ACGCTTGGCA
ACTGCAGCAC CGCTGGCACT GCGCGGCATT CTGGATGCGG TGGTGTTCGG CGGCGAGTGC
GCTATGGAAG AAGGTCTGCA GCTGGAAACC GCGCAATTTG CGCTGTTGTT CGCCACCGAC
GACATGCGCC AAGGCACCCG TGCGTTTCTC GACAAGCGCC CTGCTCACTT CAAGAACCGC
TGA
 
Protein sequence
MSNHVILIAD HASIRTITVN RPDKLNALNQ QTMQALDQAF QDAAAADDVR AVILTGAGPK 
AFVAGADIAE MSDLSAIQGR AFSLLGQQLM RRIERMPKPV IAMINGFALG GGLELAMACH
LRIAATTAHL GQPEINLGLI PGFGGTQRLL RLTGRAAALE LCLLGLPIDA ARALQLGLVN
RVVEVDALHE ETLALAQRLA TAAPLALRGI LDAVVFGGEC AMEEGLQLET AQFALLFATD
DMRQGTRAFL DKRPAHFKNR