| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00738 |
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| Symbol | |
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| ID | 6305650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2176245 |
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| End bp | 2178017 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642639418 |
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| Product | DNA ligase |
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| Protein accession | YP_001913285 |
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| Protein GI | 188576356 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.453456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCGC AGCTGCGCGC GTGGGGATTT CCAGTGAGTT CGCTAGTCGA AGTGGTGCAG
GGCAGCGACG GTCTGCTGGC GTATTACCAG CGCATCGGTG AGGCGCGCGA CGGCTTGCCC
TTCGATATCG ATGGTGTGGT CTACAAGCTC GACGATCTGG CCGGGCAACG CGAGATGGGC
TTCGTCTCGC GTGCGCCGCG TTGGGCGCTT GCGCACAAAT TCCCGGCGCA GGAACAGTCC
ACCACCGTCG AAGCCATCGA GATCCAGATC GGACGTACCG GTGCGGCCAC GCCGGTGGCG
CGTTTGAAGC CGGTGCATGT GGCCGGGGTG ATCGTCACCA ATGCCACGCT GCACAACGCC
GACCAGATCG CGCGGCTGGA TGTGCGCGTG GGCGATACGG TGATCGTGCG CCGCGCCGGC
GATGTGATTC CTGAAGTGGC CGCCGTGGTA GCCGACCAAC GCCATCCCGC AACGCAGCCG
TGGCAGATGC CCACGCAATG CCCGGTCTGC GGTTCGGAGA TCGTGCGCGA AGAAGGTCAG
GCGGTGTGGC GCTGCTCCGG CGAGTTGACC TGCCCGGCGC AGCGCAAGGA AGCCTTCCGG
CATTTCGTCT CGCGGCGCGC GATGGATGTG GATGGTCTGG GCGAAAAATT CATCGAGGTG
TTGGTCGACA GCGGCGTGGT GCAAGGTGTG GCCGATCTGT ATCTGCTCAC GGTGGATCAG
CTGCTGCAAC TGCGCATGAT CAGCACGGCC GAAAGTCCGC ATGCGTTCTT GCGCGAGGCG
CGCGAGCATC TGGCCAGCGG CGCGTATGCA CAGCTGGAAG CCACCTTGGT CGGTATCGGC
GTGGACCTGG CCGGCGAGCG CGAGGTGCCG CAAACCTGGC AGGCCGATCT ACTGCGCGCA
GGCCTGCCGA CGTTCGACTG GAATCGCAAG AAGATCGCCA CCAAGTGGGC AGAGAATCTG
ATCGAGGCGA TTGAAACATC GCGCGACACC ACGCTGGAGC GTTTTCTGTT TGCGCTGGGC
ATCGAACACG TAGGCGAAAG CACGGCGAAG GCGTTGTCGG CGTGGTTTGG CGATCTGGAC
TTGATTCGTC ATCTGCCCTG GCCGCTGTTC AAGCGCGTGC CGGATATCGG TGGAGAAGTG
GCGCGTTCGC TGGGGCATTT CTTCGATCAG CCCGGGAATC AGAAGGCCAT CGATCATCTG
CTGGCGCGCA AGGTGCGCAT CGGCGACACC CATCCGCCTT CGCCGAAGCT GCGTGGCGAG
CTGCGCTTGG CCAATTTGCT GGAGGACCTG GAGATTCCCA AGGTGACGCC GATTCGCGCC
GCCCAGATCG CGACTGCGTT TGGTTCCATC GATGCCCTGC GCAATGGCGG TCCCGAGCCT
CTCGTCGAAG CGGGTGTACC GCAGTCAGTG GCCGAGTCGC TCGCGACTTG GCTGTTGGTG
CCGGCCAACG ACACGCTCGC GGTTAAAGCC CAGAAAAAGC TTTCCGCGCT GCTGGCTATG
ATGCCGGAGG CTGGCGAAGA AAAGACTGGC CCGCTCGATG GACAGACCGT GGTCATCACC
GGGACCTTGG CTGCGCTGAC GCGCGATGCG GCCAAGCAGC GGCTGGAAGC ATTGGGCGCC
AAGGTCGCCG GTAGCGTCTC CAAGAAGACG GCGTTTCTGG TGGCCGGCGA AGAAGCCGGT
TCCAAGCTCG ACAAGGCGCA ATCGCTGGGC GTGGAGATCT GGGACGAAGC GCGTCTGCTG
GCCTTCCTGG GCGAACACGG CCAACAGCGA TGA
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| Protein sequence | MLAQLRAWGF PVSSLVEVVQ GSDGLLAYYQ RIGEARDGLP FDIDGVVYKL DDLAGQREMG
FVSRAPRWAL AHKFPAQEQS TTVEAIEIQI GRTGAATPVA RLKPVHVAGV IVTNATLHNA
DQIARLDVRV GDTVIVRRAG DVIPEVAAVV ADQRHPATQP WQMPTQCPVC GSEIVREEGQ
AVWRCSGELT CPAQRKEAFR HFVSRRAMDV DGLGEKFIEV LVDSGVVQGV ADLYLLTVDQ
LLQLRMISTA ESPHAFLREA REHLASGAYA QLEATLVGIG VDLAGEREVP QTWQADLLRA
GLPTFDWNRK KIATKWAENL IEAIETSRDT TLERFLFALG IEHVGESTAK ALSAWFGDLD
LIRHLPWPLF KRVPDIGGEV ARSLGHFFDQ PGNQKAIDHL LARKVRIGDT HPPSPKLRGE
LRLANLLEDL EIPKVTPIRA AQIATAFGSI DALRNGGPEP LVEAGVPQSV AESLATWLLV
PANDTLAVKA QKKLSALLAM MPEAGEEKTG PLDGQTVVIT GTLAALTRDA AKQRLEALGA
KVAGSVSKKT AFLVAGEEAG SKLDKAQSLG VEIWDEARLL AFLGEHGQQR
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