Gene PXO_00603 details

Gene Information

• Locus tag: PXO_00603
• Symbol: sdhD
• ID: 6305791
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 2324417
• End bp: 2324803
• Gene Length: 387 bp
• Protein Length: 128 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642639557
• Product: succinate dehydrogenase, hydrophobic membrane anchor protein
• Protein accession: YP_001913421
• Protein GI: 188576492
• COG category: [C] Energy production and conversion
• COG ID: [COG2142] Succinate dehydrogenase, hydrophobic anchor subunit
• TIGRFAM ID: [TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCGCT ACCGTACCCC GTTGAAAAAC GTGCGCGGCC TGGGCGCCGC CAAGACCGGT 
ACCGAACATT TCGTGATGCA GCGCCTGACC GCGGCCGCAC TGGTGCCGTT GTCGATCTGG 
TTCCTGATCT TCGTGCTGAG CCTCATGGGT GCCGATCATG CTGCGGCGAC CGCCGCAGTG 
GCTAAACCGT GGAATGCGAT TCTGCTTGTC GCTTTCCTGA TTGCCTCGTT CTGGCATGCG 
CAGCTGGGCA TGCAGGTGGT GCTGGAAGAT TACGTGCACG ACTCGTTGCT CGCACTGACG 
GCGCAGACAC TCGTGCGTTT CGTTGCCGTG GTGGGCGCCA TCGTCAGCGT GTTTGCCGTG 
GCGCGTATCG CGCTGGGCAT GAGCTGA 

 

Protein sequence

MSRYRTPLKN VRGLGAAKTG TEHFVMQRLT AAALVPLSIW FLIFVLSLMG ADHAAATAAV 
AKPWNAILLV AFLIASFWHA QLGMQVVLED YVHDSLLALT AQTLVRFVAV VGAIVSVFAV 
ARIALGMS