Gene PXO_00587 details

Gene Information

• Locus tag: PXO_00587
• Symbol: lpxK
• ID: 6305807
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 2338337
• End bp: 2339377
• Gene Length: 1041 bp
• Protein Length: 346 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 642639573
• Product: tetraacyldisaccharide 4'-kinase
• Protein accession: YP_001913437
• Protein GI: 188576508
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1663] Tetraacyldisaccharide-1-P 4'-kinase
• TIGRFAM ID: [TIGR00682] tetraacyldisaccharide 4'-kinase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.0719411
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAGC GCGGCGCCCG CACGCCGGGC TTCTGGTACG ACAACAACAC GCCGATCCCC 
TTGCCGGCAC GCATTCTGGT ACCTGTCTAT GGCGCCGCGA TCGCGTTGCG TCGGGCCCTG 
TACCGCCGCG GTTGGCGCAA GCGCCACGGC GTGCCGGTGC CGGTGATCGT GGTCGGCAAC 
GTCACTGCCG GCGGCACCGG CAAGACGCCG CTGACGATCG CCTTGGTTGC GAAGCTGCAG 
GAAGCCGGCT GGACGCCTGG CGTTGCCAGC CGTGGCTATG GCCGCGATGA GGCTGGTAAG 
GCGCGGTGGG TGGAGGCAGA CACACCGGTG GCGCTCGGCG GCGATGAGCC GGTGCTGATC 
GCCTGGAAAA CCGGTGCACG CGTGCGCGTC GACAGCGACC GGCTTGCTGC TGCCCGCGCT 
CTGGTCGAGG CGGGCTGCGA CATCGTGATC TGCGATGACG GTCTGCAGCA TTACCGCCTG 
GCGCGCGATG TCGAAATCGA AGTGGTCGAT GGTCAGCGCC GTTATGGCAA CGGACGTTTG 
TTGCCTGCCG GGCCGCTGCG CGAACCGGTT GCGCGCGCGC GCGATTGCGA TTTCCGCGTG 
GTCAATCTCG GCCAGGCCAG TACGACCGCA GCGCCGCAGG CGCCGGACGA TGCCGGGTTC 
GGCGAATGGC AGATGCGCTT GAGCATCGAC AGCGTGCAGC CGATGGACGG CAAGCGTGCG 
CAGCCCTTGA GCATGCTTGC CGGACAACGC GTGCATGCCG TGGCAGGGAT CGCGTATCCG 
GAACGCTTCT TCGCGATGCT GCGCGCGCGC GGCATTGGCG TGGTGCCGCA TGCGTTTCCG 
GATCATCACG TCTATCGCGC TGCGGATTTC AGCTTCGGCA GCCGCCTGCC GGTGCTGATG 
ACCGAAAAGG ACGCGGTGAA ATGCCGCCCG TTTGCCGACG AATGGCTGTA CAGCGTGCCG 
CTCAAGGCGG AACTGCCGGC CGCGTTCTGG GTGAGCCTGC TGGACCGGCT GAATAAGCTT 
GCGAGCCGGC AGGGCGTGTG A 

 

Protein sequence

MSKRGARTPG FWYDNNTPIP LPARILVPVY GAAIALRRAL YRRGWRKRHG VPVPVIVVGN 
VTAGGTGKTP LTIALVAKLQ EAGWTPGVAS RGYGRDEAGK ARWVEADTPV ALGGDEPVLI 
AWKTGARVRV DSDRLAAARA LVEAGCDIVI CDDGLQHYRL ARDVEIEVVD GQRRYGNGRL 
LPAGPLREPV ARARDCDFRV VNLGQASTTA APQAPDDAGF GEWQMRLSID SVQPMDGKRA 
QPLSMLAGQR VHAVAGIAYP ERFFAMLRAR GIGVVPHAFP DHHVYRAADF SFGSRLPVLM 
TEKDAVKCRP FADEWLYSVP LKAELPAAFW VSLLDRLNKL ASRQGV