| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00576 |
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| Symbol | rhsD |
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| ID | 6305821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2351066 |
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| End bp | 2352907 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642639587 |
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| Product | RhsD protein |
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| Protein accession | YP_001913448 |
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| Protein GI | 188576519 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCTCA CCAGCCCGGA TACCGGCGTC ACCAGCTACA CCTACGACAG CGCCGGCAAC
CGCGCCAGCC GGACCGACGC GCGCGTCACC ACCACCGGCT ATGGCTACGA CGCACTCAAC
CGCCTGACCA AGGTCACTTA CCCGACCACC AACCTCAACG TCACCTACAC CTATGACGTG
ACCCAGACGG CCTGCGGCAG CGGCGAGACC TTCTCCGTCG GTCGCCTGAC CAGGATGCAG
GACGGCGGCG CCATCACCCA GTATTGCTAC AACCGCTTCG GCGACCTGGT GCGCAAGGTG
CAGAGCACCA ACGGCAAGGC CCTTGTCCTG CGCTACGACT ACACCGTCGG CGGCCGCCTG
CAACGCATGA CCTACCCCGA TGGGGCGGTG GTCGACTACC TGCGCAACGC ACTGGGCCAG
ATCACCGAGG TCGGCGTCAC GCCGGCAGGC GGCAACCGTC AGGTGCTGCT GGGCAATGCC
AGCTACTACC CGTTCGGCCC GGCCGCCGGC TGGACCTACG GCAATGGCCG CAGGCTCGCC
CGCCGGTATG ACCTGGACTA TCGCCCCCAG GCCATCCAGG ACACCCGGCC CGGCGGACTG
GACGTCGGCT TCGACCCGGC CGGCAACCTC ACCGCGCTGA CGCCTGCCGG CAACACCACC
CCGGAGGTCG GTCTGCGCTA TGACGCCCTC GGCCGCCTGA CCACCTTCAC CGACGGCACC
ACCGGCACGG TGATCGACGG CTATAGCTAT GACGCCACCG GCAATCGCCT CAGCGCCAAG
GTCGGCACCA CGACGCAGCC CTACACCTAC CCGACCGACA GCCATCGCCT CAGCGCCGTG
GCCGGCGTGG CCCGCAGCTA CGACGCCACC GGCAACACCA CCGCCATCGG CGGCAACACG
CGCCAATACG TCTACGACAG CAATGGCCGC ATGAGCCAGG CCCGCCGCGC CGGCGTGGTG
ACCATGAACT ACCGCTACAA CGGTAAAGGC GAACAGGTGC AGCGCTTCCT CGGCACCACC
AACACCTACA CGCTCTACGA TGAAGCCGGC CACTGGCTGG GCGACTACGA CACGAATGGC
GCGCCCAAGC AGCAGGCGAT CTGGCTGAAC GACCTGCCGG TCGGCCTGCT CGCCAACGCC
AACAAACTGC ACTACATCGA ACCCGATCAC CTGGGCAGTC CACGCGTGGT GATCGACCCG
ACCCGCGATG TGGCGGTATG GACATGGAGC TTGAAGGGCG AGGCCTTCGG CAATACCGCG
CCGGATCAGG ATCCTGATGG AGATGGTGCA GCGCTAGTCC TGGATATGCG CTTTCCGGGG
CAGCGGTTTG ATGCGGCGAG TGGGTTGAAT CAGAACTACT TTCGGGATTA TGAGGCTGCG
ACTGGACGGT ATAGACAGAG TGATCCGATT GGACTGAACG GAGGATTTTC CACATTCTCC
TATGTAGAGT CATCCACATT TAAATACAGC GATGCATTTG GGCTTGTCAA ACATACAAGT
GGCCGCTGGA TTGAATGTGG GAAAGGCTGC AGGATTCGGA TCGACTTTAC TTTCGATGAA
GCCACGGGCA GTAAGATCAG GCACCTGCAC TGGGAATGCA AAGGTGATAC GGGAGAATGC
GGCGAAAATG GACGTCCTTC GCACGGCGGC ACATGGGATG ACGCACCAAG CATAATCAAG
GAATGCGCAT TAAATAATGG CTTTTCTGGC AAGTCAATGA CTAACGAGAA CTTTAATTCA
CGAGAGTCAA CTCCAGAAGT GTCTGTCGGT GCAAAAGCCG TACTCTATAT CGGCGGTGCA
GCAATTATAT TTTTTGGATT TTTATCAGGG GCCGGAAGTT AA
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| Protein sequence | MKLTSPDTGV TSYTYDSAGN RASRTDARVT TTGYGYDALN RLTKVTYPTT NLNVTYTYDV
TQTACGSGET FSVGRLTRMQ DGGAITQYCY NRFGDLVRKV QSTNGKALVL RYDYTVGGRL
QRMTYPDGAV VDYLRNALGQ ITEVGVTPAG GNRQVLLGNA SYYPFGPAAG WTYGNGRRLA
RRYDLDYRPQ AIQDTRPGGL DVGFDPAGNL TALTPAGNTT PEVGLRYDAL GRLTTFTDGT
TGTVIDGYSY DATGNRLSAK VGTTTQPYTY PTDSHRLSAV AGVARSYDAT GNTTAIGGNT
RQYVYDSNGR MSQARRAGVV TMNYRYNGKG EQVQRFLGTT NTYTLYDEAG HWLGDYDTNG
APKQQAIWLN DLPVGLLANA NKLHYIEPDH LGSPRVVIDP TRDVAVWTWS LKGEAFGNTA
PDQDPDGDGA ALVLDMRFPG QRFDAASGLN QNYFRDYEAA TGRYRQSDPI GLNGGFSTFS
YVESSTFKYS DAFGLVKHTS GRWIECGKGC RIRIDFTFDE ATGSKIRHLH WECKGDTGEC
GENGRPSHGG TWDDAPSIIK ECALNNGFSG KSMTNENFNS RESTPEVSVG AKAVLYIGGA
AIIFFGFLSG AGS
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