Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00428 |
Symbol | |
ID | 6305428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1970805 |
End bp | 1971800 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642639197 |
Product | IS1113 transposase |
Protein accession | YP_001913070 |
Protein GI | 188576141 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3328] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGCGAGT TGCAGATCGA GACCCCGCGC GACCGCGCGG GCACGTTCGC GCCACAGTTG GTGAAGAAGC GCCAGGTGCG GCTGGCGGGG ATGGAGGAGA AGATTCTGGC GTTGTACGCG CGCGGCATGA CCACGCGCGA CATCGAGTCT GCGCTGGTGG ACGTGTATGG GGTGGAGATA TCGCATGGGT TGATCGCACA GGTGACCGAC GCGGTGCAGG AGGAGGCGCG GGCATGGCAA TCGAGGCCGC TGGAGGCGAT CTATCCGATC GTGTGGCTGG ACGGCATCGT GGTGAAGGTG CAGCACAACA AGCAGGTCAT CAACAAGGCC GCGCACGTGG TGCTGGGGGT CAACCTGCGC GGGGAGAAGG AAGTGCTTGG CCTGTGGTTG GCTGAACACG AGGGCGCCCA ATACTGGCTG TCGGTGTTGA CCGAACTGCG TCATCGCGGC GTGCGTGACA TCTACATCGC CTGCATGGAT GGCTTGAAGG GCCTGCCCGA AGCGGTGCAA GCGGTGTTTC CGCAGACGCT CACGCAACTG TGCATTGTGC ATTTGGTGCG GGCCAGCCTG CGCTACGTCA ACGCAGGCGA CAGCAAGGCG GTTGTGGCTG CGCTCAAGCG CATCTATCAG TCGGCCACGG CGGAAGAAGC GGCGGCGGAA CTGGAGGCGC TGGACACGCA GTGGGGCGAC AAATACCGTG CGGTGGTCCG CTTGTGGCGG GGCAACTGGG ACAACATCAT CCCGTTCTTG CAGTTCGTGC CGCAGATCCG CAAGGTGATC TACACCACCA ATGCCATCGA ATCGTTGAAC ATGGTCATGC GCAAGCTCAC CCGCAACCGG CGTATTTTCC CCAACGACGA TTCGGCGCTC AAATCGTTGT TTTTGGCCGT GCGCGAGGCA TCGAAGAACT GGCGGTCCAT CCATCACTGG AAACCGGCTC TGCAAAGCTT CCAGGTGATG TTCGGCGAAG AACGCGTGCC GATGAATGCG CTATGA
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Protein sequence | MGELQIETPR DRAGTFAPQL VKKRQVRLAG MEEKILALYA RGMTTRDIES ALVDVYGVEI SHGLIAQVTD AVQEEARAWQ SRPLEAIYPI VWLDGIVVKV QHNKQVINKA AHVVLGVNLR GEKEVLGLWL AEHEGAQYWL SVLTELRHRG VRDIYIACMD GLKGLPEAVQ AVFPQTLTQL CIVHLVRASL RYVNAGDSKA VVAALKRIYQ SATAEEAAAE LEALDTQWGD KYRAVVRLWR GNWDNIIPFL QFVPQIRKVI YTTNAIESLN MVMRKLTRNR RIFPNDDSAL KSLFLAVREA SKNWRSIHHW KPALQSFQVM FGEERVPMNA L
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