Gene PXO_00315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00315 
Symbol 
ID6305551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp2088553 
End bp2089212 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content66% 
IMG OID642639319 
ProductISXoo2 transposase 
Protein accessionYP_001913186 
Protein GI188576257 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.766168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGTGT CTGCTGTCCA ACCATCCATG AAGAAGAGAG ACGGACGCTT GGTAGCGCGG 
GCGGCGCTGG AAGAAATGCG CCTGATGGCG TTGCAACGGA TGGGCGAAGG CGAATCGCCG 
GCCGAAGTGG CCTCGTCGTT CGGGTTGCAT CGCGGCTGGG CGTACAAAGT GCTGGCGCGA 
GCACAGGAGG GCGGCGCTGG CGCATTGATG ACGCGTAAGG GCAGCGGTCG CCCGCGGACG 
TTGACGCCGG CGCAGGAGCG CCAGGTGTTG GGCTGGGTCA ATGGCAAGAA CCCTCGCCAG 
CATGGCTTCG ACTTCGGTCT GTGGACGCGG CAGGTCGTGC GAAAACTGAT CGAGAATAAG 
TTTGCCGCAA GGTTGAGTCT GGCCAGCGTC GGGACGTTGC TGGCGCGGCT GGGGCTGAGC 
CCACAGAAGC CGCTGCAACA CGCCTATCAG CGCGATCCAC TGGCGGTAGC ACAGTGGCAG 
GAGCAGACGT CCCCGGCAAT CGTGACGCAC GCCAAGCGGG AAAAGGCCGA GATTGACTTC 
TGGGACGCGT CTGGCTTCCG TGCCGATGCG GTGCAAGACG GACGTGGGCC GTCAAGGGCG 
TCACGCCGGT TGTCGCGGTG CCGGGGCAGC GCCAGAGCAT CAGTGCGGCC TCGGCGGTGA
 
Protein sequence
MPVSAVQPSM KKRDGRLVAR AALEEMRLMA LQRMGEGESP AEVASSFGLH RGWAYKVLAR 
AQEGGAGALM TRKGSGRPRT LTPAQERQVL GWVNGKNPRQ HGFDFGLWTR QVVRKLIENK 
FAARLSLASV GTLLARLGLS PQKPLQHAYQ RDPLAVAQWQ EQTSPAIVTH AKREKAEIDF 
WDASGFRADA VQDGRGPSRA SRRLSRCRGS ARASVRPRR