| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00259 |
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| Symbol | clpB |
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| ID | 6305097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1599404 |
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| End bp | 1602109 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642638868 |
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| Product | ClpB |
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| Protein accession | YP_001912744 |
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| Protein GI | 188575815 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.388989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGACA TCAGTCGCGC CGCCTTGTTC GGCAAGCTCA ACAAGACCAC CTATCGCGGT
ATCGAATCGG CCACTGCGTT CTGCAGGCTA CGTGGCGACC ACGAAGTGGA ACTGCTGCAC
TGGCTGCATC AGTTGCTGCA GGCGCAAGAC GGCGACTTGC ACCGCATCGT GCGCCGTTTT
TCGCTGGATG CGTCGCGGCT TGCACAGGAC CTGACCGTGG CGCTCGATCG CCTGCCGCGC
GGCGGTGGCG GACACTTCGA TCTGTCGGCC AGCGTGGAGG AGGCAGTGGA ACGCGCCTGG
GTGCACTGCA CGTTGCGTTA CGGGCGGCAA CGCATCCGTG GCGGCGATCT GCTGGTAGCG
ATCCTGCACG CGCGTAGCCT GCGTCACGGG TTGCTGGCGA TGTCGAGCGA GTTCGCCAAG
CTGCGCGCGG AAGCACTGGC GGACGATCTG GATGACATCG TCGCCGGCTC GCCGGAAGAC
GATGCCACCG ACGTTGCGGC GGCTGTCGCC CCCGTTGGGA CTGGCGCAAC AGGTGGTACT
GCGGCGCTCG CGCTGTACAC GGTCGACCTC ACCGCACAAG CGCGCGAGGG CAAGCTGGAC
CCGATCATCG GCCGCGACGA GGAGATTCGC CAGGTCGTCG ATATCCTGAT GCGGCGCCGC
CAGAACAACC CGATCCTGGT TGGCGAGGCC GGCGTCGGCA AGACCGCGGT GGTGGAAGGC
TTCGCACAAC GTATCGCGCG CGGCGATGTG CCGCCCGCGT TGCAGGATGT GCAGCTGCGC
ACGCTCGATG TCGGCTTGCT GCAAGCCGGC GCCAGCATGA AAGGTGAGTT CGAGCAGCGC
TTGCGCGCAG TCATCGACGA AGTGCAGGCC AGCCCCAAGC CGATCATTCT GTTCGTGGAT
GAAACCCATA CCCTGGTCGG CGCCGGTGGC GCGGCCGGCA CCGGCGATGC GGCCAACCTG
CTCAAGCCGG CACTGGCGCG CGGCACCTTG CGCACCGTAG GCGCGACCAC CTTTGCCGAG
TACAAAAAGT ACATCGAAAA AGACCCTGCA TTGACGCGGC GCTTCCAGGC CGTGCAGGTC
GACGAGCCGG ACGAGGCCAA GGCCGTGCGG ATGATGCGCG GTGTCGCCTC GACGATGGAA
CAGCACCACC GCGTGCAGAT CCTTGACGAA GCGCTGGAAG CGGCGGTCAA GCTCAGTCAC
CGCTACATCC CGGCGCGCCA GCTGCCAGAC AAATCGGTCA GTCTGCTCGA TACCGCCTGC
GCGCGCGTCG CGGTGAGCCT GCATGCCACG CCTGCGGAAG TGGACGACAG CCGTCGCCGC
ATCGAATCGC TGGACACCGA GCACGCCATC ATCGAGCGCG AGCGTGCGAT TGGCATCGTG
GTCGATGAGC GTGCTGCCGC TTGCGCCAGC CTGCTGCAAA GCGAGCACGG CCGCCTGCGC
GAGCTGGAAC AGCGCTGGGT TGCCGAAAAG GCGTTGGTCG ATGCGCTGTT GTCGCTACGC
GCGCAACTGC GAGGCGGCAA CGCGCCGGTG GAAGGGACCG GCAGTGCGTT GGAAACGGAG
GCCGAACAGC GTGCGTCTGG CGATATCGCG GTGCTCGAAA CGCCGGTACA CGTGGATCGC
GATGCGCTCT TAGCACGTTT GCAGTTGGTA CAGGCCGAAC TGGCCGCATT GCAGGGCGAA
TCGCCGCTGA TCCTGCCCAC AGTCGATTAC CAAGCCGTGG CCGCGGTGGT CGCCGACTGG
ACCGGCATCC CTGTCGGGCG CATGGCCCGC AACGAGATCG ACACCGTGCT GCGCTTGCCC
GAACTGCTGG CCAAGCGCGT GATCGGCCAG GACCACGCCA TGGAGATGAT CGCCAAGCGG
ATCCAGACCA GCCGCGCCGG CCTGGACAAC CCGGACAAAC CGATCGGCGT GTTCCTGCTG
GCCGGAACCT CCGGCGTCGG CAAGACCGAA ACCGCACTCG CCCTGGCCGA AACGCTGTAC
GGCGGCGAGC AAAACCTGAT CACCATCAAC ATGAGCGAGT ACCAAGAGGC GCACACTGTC
TCCTCGCTCA AGGGCGCACC GCCGGGCTAT GTGGGCTACG GCGAAGGTGG CGTACTGACC
GAAGCGGTGC GCCGCAAGCC GTACGCGGTC GTGCTGCTGG ACGAAGTGGA AAAAGCCCAC
CCGGACGTGC ACGAACTGTT CTTCCAGGTC TTCGACAAGG GCTGGATGGA AGACGGCGAA
GGCCGCCGCA TCGACTTCCG CAACACCTTG ATCATCCTTA CCAGCAACGC CGGCACCGAC
CTGATCGCCA GCCTGTGCAA GGACCCGGAA TTGATGCCGG ATCCGGACGG CATGGCCAAG
GCATTGCGCG AACCGTTGTT GAAGGTGTTT CCGCCGGCAT TGCTCGGGCG GCTGGTGGCG
ATTCCGTATT ACCCGCTCAG TAACGCCATG CTCGGACAGA TCGTGCGATT GCAGTTGAAC
CGCATCAAGC AGCGGATCGA AGAGCGCTAC AGGATTCCGT TCGACTACGA CGAGTCTGTA
GTGGAGCTGG TGGTGAGCCG GTGTACCGAG AGCGAATCGG GTGGCCGGAT GATCGATGCG
ATTTTGACTA ACTCGATGTT GCCGGAGATT AGCCGCAAAT TTCTTCGTGG GGTAGTGGAC
CGGAAACGGA CTGAACGCCT TGACATTCGT GTCGAAGATT CCGCATTGGT TTATTCGTTT
CTCTGA
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| Protein sequence | MADISRAALF GKLNKTTYRG IESATAFCRL RGDHEVELLH WLHQLLQAQD GDLHRIVRRF
SLDASRLAQD LTVALDRLPR GGGGHFDLSA SVEEAVERAW VHCTLRYGRQ RIRGGDLLVA
ILHARSLRHG LLAMSSEFAK LRAEALADDL DDIVAGSPED DATDVAAAVA PVGTGATGGT
AALALYTVDL TAQAREGKLD PIIGRDEEIR QVVDILMRRR QNNPILVGEA GVGKTAVVEG
FAQRIARGDV PPALQDVQLR TLDVGLLQAG ASMKGEFEQR LRAVIDEVQA SPKPIILFVD
ETHTLVGAGG AAGTGDAANL LKPALARGTL RTVGATTFAE YKKYIEKDPA LTRRFQAVQV
DEPDEAKAVR MMRGVASTME QHHRVQILDE ALEAAVKLSH RYIPARQLPD KSVSLLDTAC
ARVAVSLHAT PAEVDDSRRR IESLDTEHAI IERERAIGIV VDERAAACAS LLQSEHGRLR
ELEQRWVAEK ALVDALLSLR AQLRGGNAPV EGTGSALETE AEQRASGDIA VLETPVHVDR
DALLARLQLV QAELAALQGE SPLILPTVDY QAVAAVVADW TGIPVGRMAR NEIDTVLRLP
ELLAKRVIGQ DHAMEMIAKR IQTSRAGLDN PDKPIGVFLL AGTSGVGKTE TALALAETLY
GGEQNLITIN MSEYQEAHTV SSLKGAPPGY VGYGEGGVLT EAVRRKPYAV VLLDEVEKAH
PDVHELFFQV FDKGWMEDGE GRRIDFRNTL IILTSNAGTD LIASLCKDPE LMPDPDGMAK
ALREPLLKVF PPALLGRLVA IPYYPLSNAM LGQIVRLQLN RIKQRIEERY RIPFDYDESV
VELVVSRCTE SESGGRMIDA ILTNSMLPEI SRKFLRGVVD RKRTERLDIR VEDSALVYSF
L
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