| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00223 |
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| Symbol | talC2A |
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| ID | 6305131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 1650351 |
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| End bp | 1653557 |
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| Gene Length | 3207 bp |
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| Protein Length | 1068 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642638902 |
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| Product | TAL effector AvrBs3/PthA |
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| Protein accession | YP_001912778 |
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| Protein GI | 188575849 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.973214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCCCA TTCGTTCGCG CACGCCAAGT CCTGCCCGCG AGCTTCTGCC CGGACCCCAA
CCGGATAGGG TTCAGCCGAC TGCAGATCGG GGGGGGGCTC CGCCTGCTGG CGGCCCCCTG
GATGGCTTGC CCGCTCGGCG GACGATGTCC CGGACCCGGC TGCCATCTCC CCCTGCGCCC
TCGCCTGCGT TCTCGGCGGG CAGCTTCAGC GATCTGCTCC GTCAGTTCGA TCCGTCGCTT
CTTGATACAT CGCTTCTTGA TTCGATGCCT GCCGTCGGCA CGCCGCATAC AGCGGCTGCC
CCAGCAGAGT GCGATGAGGT GCAATCGGGT CTGCGTGCAG CCGATGACCC GCCACCCACC
GTGCGTGTCG CTGTCACTGC CGCGCGGCCG CCGCGCGCCA AGCCGGCCCC GCGACGGCGT
GCGGCGCAAC CCTCCGACGC TTCGCCGGCC GCGCAGGTGG ATCTACGCAC GCTCGGCTAC
AGTCAGCAGC AGCAAGAGAA GATCAAACCG AAGGTGCGTT CGACAGTGGC GCAGCACCAC
GAGGCACTGG TGGGCCATGG GTTTACACAC GCGCACATCG TTGCGCTCAG CCAACACCCG
GCAGCGTTAG GGACCGTTGC TGTCACGTAT CAGGACATAA TCACGGCGTT GCCAGAGGCG
ACACACGAAG ACATCGTTGG CGTCGGCAAA CAGTGGTCCG GCGCACGCGC CCTGGAGGCC
TTGCTCACGG AGGCGAGGGA GTTGAGAGGT CCGCCGTTAC AGTTGGACAC AGGCCAACTT
CTCAAGATTG CAAAACGTGG CGGCGTGACC GCAGTGGAGG CAGTGCATGC ATGGCGCAAT
GCACTGACGG GTGCCCCCCT GAACCTGACC CCGGACCAAG TGGTGGCCAT CGCCAGCAAT
ATTGGCGGCA AGCAGGCGCT GGAGACGGTG CAGCGGCTGT TGCCGGTGCT GTGCCAGGAC
CATGGCCTGA CCCCGGACCA GGTCGTGGCC ATCGCCAGCA ATGGCGGCGG CAAGCAGGCG
CTGGAGACGG TGCAGCGGCT GTTGCCGGTG CTGTGCCAGG CCCATGGCCT GACCCCGGAC
CAGGTCGTGG CCATCGCCAG CAATAACGGC GGCAAGCAGG CGCTGGAGAC GGTGCAGCGG
CTGTTGCCGG TGCTGTGCCA GGACCATGGC CTGACCCCGG ACCAGGTCGT GGCCATCGCC
AGCAATGGCG GCGGCAAGCA GGCGCTGGAG ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC
CAGGACCATG GCCTGACCCC GGACCAAGTG GTGGCCATCG CCAACAATAA AGGCGGCAAG
CAGGCGCTGG AGACGCTGCA GCGGCTGTTG CCGGTGCTGT GCCAGGCCCA TGGCCTGACC
CCGGACCAGG TGGTGGCCAT CGCCAGCAAT GGCGGCGGCA AGCAGGCGCT GGAGACGGTG
CAACGGCTGT TGCCGGTGCT GTGCCAGGAT CATGGCCTGA CCCCGGCCCA GGTCGTGGCC
ATCGCCAGCA ATATTGGCGG CAAGCAGGCG CTGGAGACGG TGCAGCGGCT GTTGCCGGTG
CTGTGCCAGG ACCATGGCCT GACCCCGGAC CAAGTGGTGG CCATCGCCAA CAATAACGGC
GGCAAGCAGG CGCTGGAGAC GGTGCAGCGG CTGTTGCCGG TGCTGTGCCA GGACCATGGC
CTGACCCCGG ACCAGGTCGT GACCATCGCC AGCAATATTG GCGGCAAGCA GGCGCTGGAG
ATGGTGCAGC GGCTGTTGCC GGTGCTGTGC CAGGACCATG GCCTGACCCC GGACCAAGTG
GTGGCCATCG CCAACAATAA CGGCGGCAAG CAGGCGCTGG AGACGGTGCA GCGGCTGTTG
CCGGTGCTGT GCCAGGCCCA TGGCCTGACC CCGGACCAGG TCGTGGCCAT CGCCAGCAAT
ATTGGCGGCA AGCAGACGCT GGAGACGGTG CAGCGGCTGT TGCCGGTGCT GTGCCAGGAC
CATGGCCTGA CCCCGGACCA GGTCGTGGCC ATCGCCAGCC ACGATGGCGG CAAGCAGGCG
CTGGAGACGG TGCAGCGGCT GTTGCCGGTG CTGTGCCAGG ACCATGGCCT GACCCTGGAC
CAGGTGGTGG CCATCGCCAG CAATGGCGGC AAGCAGGCGC TGGAGACGGT GCAGCGGCTG
TTGCCGGTGC TGTGCCAGGA CCATGGCCTG ACCCCGGACC AGGTCGTGGC CATCGCCAGC
AATAGTGGCG GCAAGCAGGC GCTGGAGACG GTGCAGCGGC TGTTGCCGGT GCTGTGCCAG
GACCATGGCC TGACCCCGAA CCAGGTGGTG GCCATCGCCA GCAATGGCGG CAAGCAGGCG
CTGGAGAGCA TTGTTGCCCA GTTATCTCGC CCTGATCCGG CGTTGGCCGC GTTGACCAAC
GACCACCTCG TCGCCTTGGC CTGCCTCGGC GGACGTCCTG CCCTGGATGC AGTGAAAAAG
GGATTGCCGC ACGCGCCGGA ATTGATCAGA AGAATCAATC GCCGTATTCC CGAACGCACG
TCCCATCGCG TTCCCGACCT CGCGCACGTG GTGCGCGTGC TTGGTTTTTT CCAGAGCCAC
TCCCACCCAG CGCAAGCATT CGATGACGCC ATGACGCAGT TCGGGATGAG CAGGCACGGC
TTGGTACAGC TCTTTCGCAG AGTGGGCGTC ACCGAATTCG AAGCCCGCTA CGGAACGCTC
CCCCCAGCCT CGCAGCGTTG GGACCGTATC CTCCAGGCAT CAGGGATGAA AAGGGCCAAA
CCGTCCCCTA CTTCAGCTCA AACACCGGAT CAGGCGTCTT TGCATGCATT CGCCGATTCG
CTGGAGCGTG ACCTTGATGC GCCCAGCCCA ATGCACGAGG GAGATCAGAC GCGGGCAAGC
AGCCGTAAAC GGTCCCGATC GGATCGTGCT GTCACCGACC CCTCCACACA GCAATCTTTC
GAGGTGCGCG TTCCCGAACA GCGCGATGCG CTGCATTTGC CCCTCAGCTG GAGGGTAAAA
CGCCCGCGTA CCAGGATCGG GGGCGGCCTC CCGGATCCTG GTACGCCCAT CGCTGCCGAC
CTGGCAGCGT CCAGCACCGT GCTGTGGGAA CAAGATGCGG CCCCCTTCGC AGGGGCAGCG
GATGATTTCC CGGCATTCAA CGAAGAGGAG CTCGCATGGT TGATGGAGCT ATTGCCTCAG
TCAGGCTCAG TCGGAGGGAC GATCTGA
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| Protein sequence | MDPIRSRTPS PARELLPGPQ PDRVQPTADR GGAPPAGGPL DGLPARRTMS RTRLPSPPAP
SPAFSAGSFS DLLRQFDPSL LDTSLLDSMP AVGTPHTAAA PAECDEVQSG LRAADDPPPT
VRVAVTAARP PRAKPAPRRR AAQPSDASPA AQVDLRTLGY SQQQQEKIKP KVRSTVAQHH
EALVGHGFTH AHIVALSQHP AALGTVAVTY QDIITALPEA THEDIVGVGK QWSGARALEA
LLTEARELRG PPLQLDTGQL LKIAKRGGVT AVEAVHAWRN ALTGAPLNLT PDQVVAIASN
IGGKQALETV QRLLPVLCQD HGLTPDQVVA IASNGGGKQA LETVQRLLPV LCQAHGLTPD
QVVAIASNNG GKQALETVQR LLPVLCQDHG LTPDQVVAIA SNGGGKQALE TVQRLLPVLC
QDHGLTPDQV VAIANNKGGK QALETLQRLL PVLCQAHGLT PDQVVAIASN GGGKQALETV
QRLLPVLCQD HGLTPAQVVA IASNIGGKQA LETVQRLLPV LCQDHGLTPD QVVAIANNNG
GKQALETVQR LLPVLCQDHG LTPDQVVTIA SNIGGKQALE MVQRLLPVLC QDHGLTPDQV
VAIANNNGGK QALETVQRLL PVLCQAHGLT PDQVVAIASN IGGKQTLETV QRLLPVLCQD
HGLTPDQVVA IASHDGGKQA LETVQRLLPV LCQDHGLTLD QVVAIASNGG KQALETVQRL
LPVLCQDHGL TPDQVVAIAS NSGGKQALET VQRLLPVLCQ DHGLTPNQVV AIASNGGKQA
LESIVAQLSR PDPALAALTN DHLVALACLG GRPALDAVKK GLPHAPELIR RINRRIPERT
SHRVPDLAHV VRVLGFFQSH SHPAQAFDDA MTQFGMSRHG LVQLFRRVGV TEFEARYGTL
PPASQRWDRI LQASGMKRAK PSPTSAQTPD QASLHAFADS LERDLDAPSP MHEGDQTRAS
SRKRSRSDRA VTDPSTQQSF EVRVPEQRDA LHLPLSWRVK RPRTRIGGGL PDPGTPIAAD
LAASSTVLWE QDAAPFAGAA DDFPAFNEEE LAWLMELLPQ SGSVGGTI
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