| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00126 |
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| Symbol | dapA |
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| ID | 6305231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1741311 |
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| End bp | 1742219 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642639002 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_001912875 |
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| Protein GI | 188575946 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.130797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCCCTTT CCGGCATCAT CACCGCCCTG GCGACCCCCT TCGGTCCCGA TGGCGCACTC
GACCTGGATG CATGGCGGCG GCTGCTGGAG CAGCAGTTGC ACGGTGGCGT GCAGGGAATC
GTGGTCGCTG GCTCCACCGG CGAAGCGGCG GCATTGAGCG AGGACGAATA CGACACGCTG
TTGCGCGCTG CCGTTGCCCA GGTGGCCGGC CGCGTGCCGG TGCTGGCCGG CACCGGCTTG
TCTGGTACTG AAAAGACCAT TGCGCAGACG CGTCGCGCCG CAGCGCTGGG CGCGCAATAC
GCGCTGGTCG TGACGCCGCC GTATGTGCGT CCGACCCAGG CCGGACTGAA AGCGCATTTT
CTGGCGATAG CCGATCACGG CGGCCTGCCG GTGGTGATGT ACAACGTGCC GGGCCGTACC
GGTTGCGACC TGCTGCCGGA GACGGTGGCC GAGCTGGTGG TGCATTCGAA TATCGTCGGC
ATCAAGGAAG CGCGTAGCGA GCCCGGGCGC GTGGCCGCGC TGGTGGCGCT GCGCAGCGAT
AGTTTTGTGG TGCTCAGTGG CGACGACGGC AGCGCAGCGC AATCGATGCT GTCCGGCGCT
GCCGGGCTGA TTTCGGTGGC CTCCAATGCC TTGCCGGCGG CGTACCGGCG CCTGTGCGAT
CTGGCTCGCG ACGGCCAGCG CGAGGCTGCC ACTGCGTGGG ACGCGCGTCT GAGCGAGTAC
CACAGCTTTT GCGGTATCGA ATCCAATCCC ATCCCGGTCA AGGCGCTACT GCAGCGTGCC
GGGATCGGCC ATGGCCTGCG CTTGCCGCTG TTACCCCTTT CTGCGGCGCA CCAGCCTGCC
GCCGACCGCC TTGCCGCCGA CGCCGTTGCG TTGGAAGCGC TTTCCAGCCG CGAAATGCTC
GCGGCCTGA
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| Protein sequence | MSLSGIITAL ATPFGPDGAL DLDAWRRLLE QQLHGGVQGI VVAGSTGEAA ALSEDEYDTL
LRAAVAQVAG RVPVLAGTGL SGTEKTIAQT RRAAALGAQY ALVVTPPYVR PTQAGLKAHF
LAIADHGGLP VVMYNVPGRT GCDLLPETVA ELVVHSNIVG IKEARSEPGR VAALVALRSD
SFVVLSGDDG SAAQSMLSGA AGLISVASNA LPAAYRRLCD LARDGQREAA TAWDARLSEY
HSFCGIESNP IPVKALLQRA GIGHGLRLPL LPLSAAHQPA ADRLAADAVA LEALSSREML
AA
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