| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00062 |
|---|
| Symbol | |
|---|
| ID | 6305288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 1800052 |
|---|
| End bp | 1800462 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642639059 |
|---|
| Product | PIN domain, putative |
|---|
| Protein accession | YP_001912932 |
|---|
| Protein GI | 188576003 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0134903 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCTC TGGATTCCTC GGTGCTGCTG GACATCCTGA TCGGCGACCC GGTCTACGGC
GAAGTGTCGG AAATCTGCAT CGGCGACGCC CTGGCGCGCG ACGAGGTCGT GGTTTGCGAC
GCCGTGGTGG CCGAAGTGCT GGCCATGCTC GACACCCAGG TGGACCTGAT GGAAACCCTG
GCCTCGATCG GCGTGCGCTA CGAGGCCACC CAGGAAGCGG CGGCGGTGCG CGCCGGTCAT
ATGAACAAGC GCTTCCGCGC ACGCGGCGGC AAGCGCGAGC GGGTGGTGGC GGATTTTTTG
ATCGGCGCCC ACGCAATGCT CCAGTGCGAT GGGTTGATCA CCCGCGACGA GGGCTTCTTC
CGCGATTACT TCAAGGGCTT GAAGATTACC GTTCCCAAGC CCGTTGCCTG A
|
|---|
| Protein sequence | MIALDSSVLL DILIGDPVYG EVSEICIGDA LARDEVVVCD AVVAEVLAML DTQVDLMETL
ASIGVRYEAT QEAAAVRAGH MNKRFRARGG KRERVVADFL IGAHAMLQCD GLITRDEGFF
RDYFKGLKIT VPKPVA
|
|---|
| |