Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_B0075 |
Symbol | |
ID | 1187453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004632 |
Strand | + |
Start bp | 63546 |
End bp | 64631 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637408334 |
Product | trbB protein, putative |
Protein accession | NP_808660 |
Protein GI | 29171614 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTCGG CATCTTTACG CGCCCCGTTT TCGGTGGACA TCCAAGGCGA TCAGCTGGTT GTCTATCAGG CAGATCAGGA AGCAGGCATC GTGACACGCA CGATTTGCAC CCTGGACCTT CGCCATCAGC ACTCGTTTTA TTTGAGCAAT GACGGTGTGG TCTGCCGCGA TGTTCAGGGT TTTGAATTCT CACTTGAAAC CCATGACAGT AACGAAACCC ATGAGCTACT GACCGCACTG TCGCGGGCTT TGCTGCGTCA TGGACGACGC AAGACCCAGC GGCGTCTGAT GGGCGTGTTC GTGCTGTTGG TTGTGCTTTG CCTCGGTGCC CCATGGCTTG GCCGAGCGCT TGAATTGCCT GTTGTAATGC CGGCGGCGCA GGTCATCACG CCCTCAGTCA CGAGCCCCCC CAAGCCGGAC CTGGCCAAGC GCAGCGCGCC GGCGCCGATC GCTTCTGAGC CACGCCAGTC CGCTGCAGAC GTGGCACCTG ACGATGGCTG GACATTGCCC AGGGAGGTTC GGGCCACACT CCCTCAAAAG CTGCACAACG CTGCCGAGCG CAAGCTGTTC ACCGTTGACT ATTCCAGCGG TCACGCGCGC ACGCTGTATG TCTTTTCGGA CCCTGGCTGC CCGAACTGCC AGCGTCTGGA GTCGTCCCTC AACACGCTCT CCGACGCCTT CAACGTGGTG GTGTTTCCTG TGCCGGTGAT TGGTAAGGAA AAGTCGATCG CCGCCATTAC GCCGGTGCTG TGCCTGCCGC CTGAGCAGCG CAAAACCCCG TGGGATCGCC TGTTTGATGC AGCCCCTGAG GGTGTGAACC TTGGGAAACC CCCGTTAAAG CCGGCGTCGG AAGGGGTGGA GTTGAAAGCG GCGCAACCAG CAGGCACGTG CGATGTTGCA GAAAAGGCCT TGGGGATCAA CCAGACGGCC TATCAGGCGT ATCGCATACC GGGCACGCCC TGGGTGATCA GCGACGATGG GCGCTATGTG CCGCAGGCGT TGTTGCGTGA TCCGATCAGG CTCAAAGCCT TCCTAGATGA GCGACCTGCC CGCCAGGTTC AGGAGGTGTC GAATGCGCCC CAATGA
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Protein sequence | MASASLRAPF SVDIQGDQLV VYQADQEAGI VTRTICTLDL RHQHSFYLSN DGVVCRDVQG FEFSLETHDS NETHELLTAL SRALLRHGRR KTQRRLMGVF VLLVVLCLGA PWLGRALELP VVMPAAQVIT PSVTSPPKPD LAKRSAPAPI ASEPRQSAAD VAPDDGWTLP REVRATLPQK LHNAAERKLF TVDYSSGHAR TLYVFSDPGC PNCQRLESSL NTLSDAFNVV VFPVPVIGKE KSIAAITPVL CLPPEQRKTP WDRLFDAAPE GVNLGKPPLK PASEGVELKA AQPAGTCDVA EKALGINQTA YQAYRIPGTP WVISDDGRYV PQALLRDPIR LKAFLDERPA RQVQEVSNAP Q
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