Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_B0012 |
Symbol | |
ID | 1187390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004632 |
Strand | - |
Start bp | 12597 |
End bp | 13655 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637408276 |
Product | hypothetical protein |
Protein accession | NP_808602 |
Protein GI | 29171556 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTTCG GGTTGATACT GTCAACACTG GCCAGCGCTG CCGATGCGCA GAAGACCTAC GGCGAGATGG ACGGTGCAGC CTTTGATAAA GCTGCCCGCA AGACTTACGC GCTGCAGGAC TTCTCCGACC ATTATCGCGC CACGGTGGAA GTTGCGGCTG CGGACGAGAC GTTTCGTCCC GGTGTCATCA CCGTGTATGG CAAAGCGAGC GACAAGTTGC TGATCCGCGT GCAATCCAAT GAGCTTGTGC TGGACCCTGA TGCGAAAAGC GGCAAGATCA AGGCCAACGT GCAAGAGCTG CCGTATGGCG AGCAGAGTGT ACTGATCTAC AATGATTTCA ACTTTGACGG CATAAAGGAT CTGGCCTTGA TGGACGGCCA GAATAGCTGT TATCGCGGGC CGTCGTTTCA AGTGTTTCTC GGTACGGCGA ACGGTTTCAA GCACAGCGAT TCGTTTACCA AGCTTGCGCA GAACAACTGC GGCATGTTCG CAGTGGATGA GAAGAAGCAC CAGATCAGCA CCATGACCAA AGACGGTTGC TGCTGGCATC AGACTGCCAC GTACAGCATC CGCGGTGGCG AACCGGTCAT GGAAACCGAG ACGATCACCG AACAAACCGG TGCATCGGGT GTGCCTACGC AAACGGTCGG CATGAACAAG AATGGCAAGA TGGTACGCAC GACCAGCATG CTGTGGAAAA AAAATGATCA GCGCGAAACT CTGCTGTCGT TCAAGCTGGC ACCGGCCGGC AAGCGGGTCA TTCTGTTCCG CTCAGGGGCA GGCAGTCCGG TCTTTTACGC GGCAGTTAAC ACCAAGGATC AGGTCGGACT GCTTTATCCG CAGGCGGATG CCGAGCGGTT CGAATACGAC GCTGCGAGTA ACGCACTGAG CTTTGTGCGC GGCGACACGA CGTATCGCAT TCAGGGTGAT GCGAAGGGTG CGCCCAAAAG CATGCACGTG GTGGCGCGCG GCAAGGCAAC CGATCTGAAG CTGCTTGCCG AACCTGCCCA AGGCTCACTC GAAAAGGTCG CTGAAGCGAT CAAGGCAAGC GCCCAGTAG
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Protein sequence | MLFGLILSTL ASAADAQKTY GEMDGAAFDK AARKTYALQD FSDHYRATVE VAAADETFRP GVITVYGKAS DKLLIRVQSN ELVLDPDAKS GKIKANVQEL PYGEQSVLIY NDFNFDGIKD LALMDGQNSC YRGPSFQVFL GTANGFKHSD SFTKLAQNNC GMFAVDEKKH QISTMTKDGC CWHQTATYSI RGGEPVMETE TITEQTGASG VPTQTVGMNK NGKMVRTTSM LWKKNDQRET LLSFKLAPAG KRVILFRSGA GSPVFYAAVN TKDQVGLLYP QADAERFEYD AASNALSFVR GDTTYRIQGD AKGAPKSMHV VARGKATDLK LLAEPAQGSL EKVAEAIKAS AQ
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