Gene PSPTO_B0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_B0012 
Symbol 
ID1187390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004632 
Strand
Start bp12597 
End bp13655 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content57% 
IMG OID637408276 
Producthypothetical protein 
Protein accessionNP_808602 
Protein GI29171556 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTTCG GGTTGATACT GTCAACACTG GCCAGCGCTG CCGATGCGCA GAAGACCTAC 
GGCGAGATGG ACGGTGCAGC CTTTGATAAA GCTGCCCGCA AGACTTACGC GCTGCAGGAC
TTCTCCGACC ATTATCGCGC CACGGTGGAA GTTGCGGCTG CGGACGAGAC GTTTCGTCCC
GGTGTCATCA CCGTGTATGG CAAAGCGAGC GACAAGTTGC TGATCCGCGT GCAATCCAAT
GAGCTTGTGC TGGACCCTGA TGCGAAAAGC GGCAAGATCA AGGCCAACGT GCAAGAGCTG
CCGTATGGCG AGCAGAGTGT ACTGATCTAC AATGATTTCA ACTTTGACGG CATAAAGGAT
CTGGCCTTGA TGGACGGCCA GAATAGCTGT TATCGCGGGC CGTCGTTTCA AGTGTTTCTC
GGTACGGCGA ACGGTTTCAA GCACAGCGAT TCGTTTACCA AGCTTGCGCA GAACAACTGC
GGCATGTTCG CAGTGGATGA GAAGAAGCAC CAGATCAGCA CCATGACCAA AGACGGTTGC
TGCTGGCATC AGACTGCCAC GTACAGCATC CGCGGTGGCG AACCGGTCAT GGAAACCGAG
ACGATCACCG AACAAACCGG TGCATCGGGT GTGCCTACGC AAACGGTCGG CATGAACAAG
AATGGCAAGA TGGTACGCAC GACCAGCATG CTGTGGAAAA AAAATGATCA GCGCGAAACT
CTGCTGTCGT TCAAGCTGGC ACCGGCCGGC AAGCGGGTCA TTCTGTTCCG CTCAGGGGCA
GGCAGTCCGG TCTTTTACGC GGCAGTTAAC ACCAAGGATC AGGTCGGACT GCTTTATCCG
CAGGCGGATG CCGAGCGGTT CGAATACGAC GCTGCGAGTA ACGCACTGAG CTTTGTGCGC
GGCGACACGA CGTATCGCAT TCAGGGTGAT GCGAAGGGTG CGCCCAAAAG CATGCACGTG
GTGGCGCGCG GCAAGGCAAC CGATCTGAAG CTGCTTGCCG AACCTGCCCA AGGCTCACTC
GAAAAGGTCG CTGAAGCGAT CAAGGCAAGC GCCCAGTAG
 
Protein sequence
MLFGLILSTL ASAADAQKTY GEMDGAAFDK AARKTYALQD FSDHYRATVE VAAADETFRP 
GVITVYGKAS DKLLIRVQSN ELVLDPDAKS GKIKANVQEL PYGEQSVLIY NDFNFDGIKD
LALMDGQNSC YRGPSFQVFL GTANGFKHSD SFTKLAQNNC GMFAVDEKKH QISTMTKDGC
CWHQTATYSI RGGEPVMETE TITEQTGASG VPTQTVGMNK NGKMVRTTSM LWKKNDQRET
LLSFKLAPAG KRVILFRSGA GSPVFYAAVN TKDQVGLLYP QADAERFEYD AASNALSFVR
GDTTYRIQGD AKGAPKSMHV VARGKATDLK LLAEPAQGSL EKVAEAIKAS AQ