Gene PSPTO_5640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5640 
Symbol 
ID9443564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp2910705 
End bp2911238 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003778208 
Protein GI300781813 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00146587 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATCC GGTCCCTGAC CCTTGCCAGC CTGCTCGTCG CTGCCGGTAC AGCGTTTGCC 
GCTGACAGCG ACAACCCTCT GGCGCAGGAG CGCGGCAAGT CGCGCCCTCT GATCATCATC 
GCGCCGAGCA CGATTGACCC CACGCTGGTC AGCCTCAAGA AGGCGCTGGA CGAGCCTGCC 
AACCGCGAAG CCTTTGCGCA ACGCAACATG GTCTTGTTCA CAGTGGTCAA TACGATTGGT 
GAACGCAACG GCAAGACCCT CGACGCACAG TCGACCATGG CCTTGATCCG TGAGCTGAAA 
CTGGGGGCAG GTGCGCAGAC CAAGGTGATT CTGGTGGGCA AGGATGGCGA GAAAAAAATC 
GAGAAGTCTG GCGCGATAGA CCCCAAGGAG ATCTTCGCCA CCATCGACCA AATGCCGATG 
CGCGAAAAAG AGGCCGCCGC GCCACCGCCC GAGCCGGAAG CCAAGCCTGC ACCGGCTGAA 
AAACAGGGCA AGCCAGCGAA AGGCGGTGCG CCCGGCAAGA CGCTGGACGA CTGA
 
Protein sequence
MLIRSLTLAS LLVAAGTAFA ADSDNPLAQE RGKSRPLIII APSTIDPTLV SLKKALDEPA 
NREAFAQRNM VLFTVVNTIG ERNGKTLDAQ STMALIRELK LGAGAQTKVI LVGKDGEKKI 
EKSGAIDPKE IFATIDQMPM REKEAAAPPP EPEAKPAPAE KQGKPAKGGA PGKTLDD