Gene PSPTO_5527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5527 
Symbol 
ID1187219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6293289 
End bp6293687 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content60% 
IMG OID637396846 
Producthypothetical protein 
Protein accessionNP_795251 
Protein GI28872632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGGG TTTCAACAGG TCTGATTGCT TCGATAGGTC TAGCGGTGCT GTTCAGTGCG 
CAGGCAATGG CAGCATTCGG CAAGCCCCCG GCCGACCTCG CGACTTGCAC ACGCAGCGTG
ACCGTTCTGG CGTGCAGCGA CGCACAGGGC AACAGCTACA GCGTTGTCAC CGCGGGCTCG
ACGACCTGGT TGAGAGGTTA CGAGAAGATT GATAAACGTC GCTGGGTGCA GACCAACACT
CGCTATGGTC AACTGACGTT TTTTACCGGG CTGGCCTCGA ATGGCGAAGC CTGGGTTGGC
ACTGTCCAGC GCGTGGGCTG GACCACCATC ACGCGGGTAT CCAGCTCAAG CGGTACGCGC
AGCAAGATCA CCTGCAGCCG CCTGAATGGC TGCCGCTGA
 
Protein sequence
MNRVSTGLIA SIGLAVLFSA QAMAAFGKPP ADLATCTRSV TVLACSDAQG NSYSVVTAGS 
TTWLRGYEKI DKRRWVQTNT RYGQLTFFTG LASNGEAWVG TVQRVGWTTI TRVSSSSGTR
SKITCSRLNG CR