Gene PSPTO_5511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5511 
Symbol 
ID1187203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6277474 
End bp6278889 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content59% 
IMG OID637396830 
Productacetyl-CoA carboxylase, biotin carboxylase, putative 
Protein accessionNP_795235 
Protein GI28872616 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAACAA AAATTCTGAT CGCCAACCGC GGAGAAATCG CCGTCCGCAT CGTGCGTGCC 
TGTGCCGAAA TGGGCATTCG CTCGGTAGCG ATCTTCTCCG ATGCGGACCG GCATGCCTTG
CACGTCAAGC GGGCCGACGA AGCCTATAGC ATTGGTGCCG AACCACTGGC CGGTTACCTG
AACCCGCGCA AGCTGGTGAA TCTGGCGGTG GAGACCGGGT GTGATGCATT GCACCCAGGT
TATGGTTTTT TGTCGGAAAA CGCTGAACTC GCTGACATCT GCAATGAACG TGGCATCAAA
TTCATCGGGC CGTCGGCAGA AGTGATTCGC CGTATGGGCG ACAAGACCGA AGCGCGGCGC
AGCATGATCA AAGCCGGTGT GCCGGTAACG CCGGGTACTG AAGGCAATGT GGCAGATATC
GAAGAAGCGC TGGTCGAAGG CGAGCGTATC GGTTATCCGG TGATGCTCAA GGCCACTTCC
GGTGGTGGGG GGCGCGGTAT CCGCCGTTGC AACAGCCGCC AAGAGCTGGA GCAGGCTTTC
CCCAGGGTGA TTTCCGAGGC GACCAAAGCC TTTGGCTCGG CAGAAGTCTT TCTGGAAAAG
TGCATCGTTA ACCCCAAGCA CATCGAAGCG CAGATTCTCG GCGACAGCTT CGGCAACGTG
GTGCACCTGT TCGAGCGTGA CTGTTCCATT CAGCGCCGTA ACCAGAAGCT GATCGAGATC
GCTCCCAGCC CGCAACTGAC CCCTGAGCAG CGCGCCTATA TCGGCGATCT GTCGGTGCGT
GCGGCCAAGG CTGTCGGTTA CGAGAACGCG GGTACCGTGG AGTTTCTGCT CGCCGAGGGC
GAGGTGTACT TCATGGAGAT GAACACCCGT GTACAGGTCG AGCACACCAT CACCGAAGAA
ATCACCGGCA TCGACATTGT TCGCGAGCAG ATCAGCATCG CGTCCGGCCT GCCGTTGTCG
GTCAAGCAGG AAGACATCAT TCACCGCGGT TTTGCCCTGC AGTTTCGAAT CAACGCAGAA
GACCCGAAAA ACAACTTCCT GCCCAGCTTC GGCAAGATCA CCCGGTATTA CGCCCCCGGC
GGGCCTGGCG TGCGCACCGA CACGGCGATT TACACCGGCT ACACGATTCC GCCGTACTAC
GACTCCATGT GCCTGAAGCT GATCGTCTGG GCATTGAGCT GGGAAGAGGC GATGGACCGC
GGCCTGCGCG CGCTGGATGA CATGCGCCTG CAAGGGGTGA AGACCACGGC TGCCTATTAC
CAGGAAATTC TGCGCAACCC GGAGTTTCGC AGCGGTGAGT TCAATACCAG CTTTGTCGAA
AGCCACCCTG AGCTGACCAA TTACTCGATC AAGCGCAAAC CCGAAGAGCT GGCCCTGGCC
ATCGCTGCCG CCATTGCCGC ACATGCAGGC TTATGA
 
Protein sequence
MITKILIANR GEIAVRIVRA CAEMGIRSVA IFSDADRHAL HVKRADEAYS IGAEPLAGYL 
NPRKLVNLAV ETGCDALHPG YGFLSENAEL ADICNERGIK FIGPSAEVIR RMGDKTEARR
SMIKAGVPVT PGTEGNVADI EEALVEGERI GYPVMLKATS GGGGRGIRRC NSRQELEQAF
PRVISEATKA FGSAEVFLEK CIVNPKHIEA QILGDSFGNV VHLFERDCSI QRRNQKLIEI
APSPQLTPEQ RAYIGDLSVR AAKAVGYENA GTVEFLLAEG EVYFMEMNTR VQVEHTITEE
ITGIDIVREQ ISIASGLPLS VKQEDIIHRG FALQFRINAE DPKNNFLPSF GKITRYYAPG
GPGVRTDTAI YTGYTIPPYY DSMCLKLIVW ALSWEEAMDR GLRALDDMRL QGVKTTAAYY
QEILRNPEFR SGEFNTSFVE SHPELTNYSI KRKPEELALA IAAAIAAHAG L