Gene PSPTO_5470 details

Gene Information

• Locus tag: PSPTO_5470
• ID: 1187162
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 6232116
• End bp: 6232661
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637396789
• Product: hypothetical protein
• Protein accession: NP_795194
• Protein GI: 28872575

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGGTGC TGCTTTCCAC GCGGAGCAGC ACCTGGTTGT GGATTAAGGT TTATGTACCG 
ATCTTCGTCG AAATAGATCT TTCCTTGCAG GCTTTTCCCT TCAACCTACT ACACTGTACT 
AGCCACCCGG GCTCTGATGA CAGGGTCTGG TTCACGCCGA GGAACTGTAT GAAATTTCGC 
TTTCTTCTTT GGATGCTGGG CCGAATGATG GCCCGCGCCA GTAGAGACAA TCCTGATTTC 
CAGCAGCAGT TGGCTGGCAA GAACCTTACC TTTCAGTTGC AGACCATAGA CGGCAGGATT 
GCGCGCCATT TCGTGGTTCA GGATCAACGC ATTCGCACAG CGAGCGGTGT AGTGGCAGAG 
CCTGCCTTTG CCATCGCGTT TCGTGACGCA GCGTTCGGTT TTGCCACACT TCAGGCAAAA 
AACAAGCAAT TGGCGTTCAT GAGGGGCGTT CAGGACAAGG ACATTCAGAT CAAGGGCAAC 
CCGGCTCTGG TAATCTGGTT CCAGGGCCTT ACCAAGTACC TCAAGCCGAA AAAGAAAGCA 
GCCTGA 

 

Protein sequence

MTVLLSTRSS TWLWIKVYVP IFVEIDLSLQ AFPFNLLHCT SHPGSDDRVW FTPRNCMKFR 
FLLWMLGRMM ARASRDNPDF QQQLAGKNLT FQLQTIDGRI ARHFVVQDQR IRTASGVVAE 
PAFAIAFRDA AFGFATLQAK NKQLAFMRGV QDKDIQIKGN PALVIWFQGL TKYLKPKKKA 
A