| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5448 |
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| Symbol | |
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| ID | 1187135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6198893 |
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| End bp | 6201319 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637396763 |
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| Product | hypothetical protein |
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| Protein accession | NP_795173 |
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| Protein GI | 28872554 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.592113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCTGT TGGGCGGTAA TGGCAGTACT GCCCAGTGGT GGGATGATGC GCTGCCACAC
TTTCAGCGCT ATCAGGTTAT GCCGCTGGAG TTGCCCGGCT TCGGCAGCAA CCCGCTACCG
CCCTGCGACG ACCTTGCCGC CTATGCGGAT GCGCTGTTGG CGGCAACGGT GAGAGGCAGT
TCAATCGTCG CGGTGGGCGT CAACGCCTTG CTGGTCATGC ATGCGTTGCA ACGACAGCCG
GGGCACTTTT GCAGAAGCGT GTTGCTGGCA CCCGTGGGCG CTTTCCTGTG GCAGAGAAGC
CTGCCTGCAT TGATGTCGCC GTTGCCTATC CGCAAAACCA TTCACTGGTT GCTGGCCAAC
AAGCCCAAGC TGTTTGCGCA CAAGTTTTCC AGGCACGCCT GGCCCGACTC GCACTACCGG
CGTATGGGGG CCGGTTACGC CCGCTGCCGC GCTTTCATTC CGTATTGGGA CATGGTGCGC
GCCGACACCG CGCTGCCGTT GCTGGAGTGG GTGCAGGACC CGATCGAGCT GGTCTGGGGC
GATCAGGACA AAGTCCTGGG TATCGATCAA GCCGCCGCCT GGTCCGCTAT CCTGGCCCGT
GCCGACCTGA CCATCAGCTT AAAACCGGGC TGGGGACATT ACCCGTGGAT CGACTCGCCG
GCCGAGTTCG CCCAGTGGCT CGAATCCGGC GAGCGCGGTT TTGTCGCACA CACCAAAGGC
GGACGTCTGC GCCTGGCGGC CATTACCGGG CAACCGGTGC CTGCGGCGTT GTCACTTGTG
CAGGGTGACG ACTCGGCCTT GCCAGCGTTT TTGGCCAGCC AGCCCGATGC CGTCTGGGCG
GTGCGTTCGT CCAGCTTCGG CGAGGATCAG GCCGATGCGG CAAATGCCGG GCTCAGCACC
ACCTTTCTTC GTGAGCCCGC CCACAACGTG CCCGCGCGTA TTGCAGAACT GCACAGTGCC
GGGGTCGAAG AGGTCGTGGT GCAGCGCTTC ATTACACCGG TGCTTTCCGG TATCGCATTT
GTGCGTCACC TGTCGGTCGA GCTGGAGTGG GTCGAAGGTC ATCTGGAGTC GCTGGCCGAC
GGTCAGGCAA GCCCTGATCG AGCGATCCTT TCCCGCCTCG GCGAATCCTG GAGCAGCGGC
AGCTTCAAGC CCTCCCATGG GTTGACTCAG GAAATGCTCT GGGGCTTTCT GCAAGGTGTT
CTGCGGGTCT TCCATTACGT GCCGGGCGAT GTCGAATGGG CGTGGGATGG CAGCCGGTTG
TGGTTGCTGC AATACCGACC GATCAGCGAT TACGGCTGGC GTCGGCACCT GACCGCCGCC
AACATTGCCG AGATCCTGCC GCCACAGCCC AGTCGCCTGG TGGAATACGC CCAGCGACGT
GCCGCAGGCA GTATCCCGGC GATCATGGCG CGCTGGGACT CACGCATCTT GCAGGATAAC
GAGCCGTTCA CAGCGTTGTT CGGCGCGGCG TCCTACATCA ACAACGACCT TTTTCTTGCG
CGCCTGGCTG ACTGGGGCAT TGCCTCCAGC AGCTACGCCG GTGAAGTCGG TGGCGCGACG
CCGCATCTGC CCTGGCGACC CCTGCGGCTG TTGCGTTCGC TGCCGTTGTT CCTGCGCATG
CAGCGCATCG CGCGTGGCCA CCTGCTGACT CTGGAACAGC AACTGCACCG TTTCGACCGG
GAGTTGCAGA CGCTGACCGC ACACGGCGCA GACGGCAAAC AACTCGCCGA CTGGTTCACG
CGCTTCTACG TGTTCGTCGT GCAGGGCAAC CTGTGTATCG CCACCTCGCT GGCCAGCAGT
GGCGGTGACC TGTTGGGGCG TCCGCCGACC GCTTACGACG ACCTTGAACA CTGCCCGCAT
CGGTTGCCCT GGGAAACCGA CCCCGCTACG CCACGCCCGG CACAGACCGA CCTGCCGTTG
CAGGCATTTC CGAGCTGGCC GAAAGCGATC CGCCTTGCCC ACAGCGCAGG CTTGCCAGGT
ATGCGCGGCT ATTACCTGCA AGTGCGCGAG TGGTACCGCG ACAACTTGAT GCGCGTGTTC
TTTCGCCTGC ACCACGCCAT GCCCGTGGCC GACCGGGCGC ACTGGTTCGC ACCCCACCCG
GATATTCGCA GCCGTGATGG CAGCTTCTGG CAGGACGGCC GCGAAGGCAC CGAGCAGGCC
ACCGGCTTCA TGATCTATCC GGGACAGGTG CAGGGCATTC TGGGTGAGGA TATCTTGCTG
GAAGACACCC TCGACCCCGG ACGCCACGCG CACTACCAGA ACGCACGCGC CGTAATCGCG
CGCATGGGTG GGCGTCTTTC CCATGGGTCT ACCTTGCTGC GCGAACTGCG CAAGCCTTCG
GCGGTGCTGC CCAATGTCGA TATGGCGTGG GTGGGAAGGG AAGTGCGGTA CGCGGATGGG
GAATTGCTGT TGGTCGAGGG GCAATGA
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| Protein sequence | MYLLGGNGST AQWWDDALPH FQRYQVMPLE LPGFGSNPLP PCDDLAAYAD ALLAATVRGS
SIVAVGVNAL LVMHALQRQP GHFCRSVLLA PVGAFLWQRS LPALMSPLPI RKTIHWLLAN
KPKLFAHKFS RHAWPDSHYR RMGAGYARCR AFIPYWDMVR ADTALPLLEW VQDPIELVWG
DQDKVLGIDQ AAAWSAILAR ADLTISLKPG WGHYPWIDSP AEFAQWLESG ERGFVAHTKG
GRLRLAAITG QPVPAALSLV QGDDSALPAF LASQPDAVWA VRSSSFGEDQ ADAANAGLST
TFLREPAHNV PARIAELHSA GVEEVVVQRF ITPVLSGIAF VRHLSVELEW VEGHLESLAD
GQASPDRAIL SRLGESWSSG SFKPSHGLTQ EMLWGFLQGV LRVFHYVPGD VEWAWDGSRL
WLLQYRPISD YGWRRHLTAA NIAEILPPQP SRLVEYAQRR AAGSIPAIMA RWDSRILQDN
EPFTALFGAA SYINNDLFLA RLADWGIASS SYAGEVGGAT PHLPWRPLRL LRSLPLFLRM
QRIARGHLLT LEQQLHRFDR ELQTLTAHGA DGKQLADWFT RFYVFVVQGN LCIATSLASS
GGDLLGRPPT AYDDLEHCPH RLPWETDPAT PRPAQTDLPL QAFPSWPKAI RLAHSAGLPG
MRGYYLQVRE WYRDNLMRVF FRLHHAMPVA DRAHWFAPHP DIRSRDGSFW QDGREGTEQA
TGFMIYPGQV QGILGEDILL EDTLDPGRHA HYQNARAVIA RMGGRLSHGS TLLRELRKPS
AVLPNVDMAW VGREVRYADG ELLLVEGQ
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