Gene PSPTO_5336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5336 
Symbol 
ID1187021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6065609 
End bp6065869 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content54% 
IMG OID637396655 
Producthypothetical protein 
Protein accessionNP_795067 
Protein GI28872448 
COG category[S] Function unknown 
COG ID[COG5460] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAG CCAAGGGCAA GCCGCCCATT CTGACCCTCT CGCCCGAGCA TGAGCAGCAG 
GCGATCGACA AGCTCAAGCG TCTGTTCGCC GACCGTTTCG AGCTGGACCT GGGTTCGTTT
GAGGTGGCAG AGGTGCTTGA ACTGTTCACT CGCGAGATCG CACCGCATTA CTACAATCGC
GCTATTTTCG ATGTTCAGCA GCACCTCAAA GAGCGCTTCG AGAGCATCGA AAGTGATCTC
TGGTCACTCG AAAAGAATTA G
 
Protein sequence
MSKAKGKPPI LTLSPEHEQQ AIDKLKRLFA DRFELDLGSF EVAEVLELFT REIAPHYYNR 
AIFDVQQHLK ERFESIESDL WSLEKN